RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 HLA-DQA1P01909 254 aa7.83□□□□□ -1.16
HDLBP-239ENST00000483086 PRSS1P07477 247 aa7.83□□□□□ -1.16
HDLBP-239ENST00000483086 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
HDLBP-239ENST00000483086 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
HDLBP-239ENST00000483086 LINC01551Q86U37 167 aa7.83□□□□□ -1.16
HDLBP-239ENST00000483086 PGLYRP4Q96LB8 373 aa7.83□□□□□ -1.16
HDLBP-239ENST00000483086 IGLV10-54A0A075B6I4 117 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 H7C1H1 209 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 ATP6V1G1O75348 118 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 CRPP02741 224 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 SRSF3P84103 164 aaKnown RBP7.82□□□□□ -1.16
HDLBP-239ENST00000483086 MIAQ16674 131 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 TMEM97Q5BJF2 176 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 KCNIP4Q6PIL6 250 aa7.82□□□□□ -1.16
HDLBP-239ENST00000483086 PANO1I0J062 215 aa7.81□□□□□ -1.16
HDLBP-239ENST00000483086 REG3AQ06141 175 aa7.81□□□□□ -1.16
HDLBP-239ENST00000483086 SMIM7Q9BQ49 75 aa7.81□□□□□ -1.16
HDLBP-239ENST00000483086 TMEM243Q9BU79 118 aa7.81□□□□□ -1.16
HDLBP-239ENST00000483086 EIF5A2Q9GZV4 153 aaKnown RBP7.81□□□□□ -1.16
HDLBP-239ENST00000483086 A0A1B0GUV1 79 aa7.8□□□□□ -1.16
HDLBP-239ENST00000483086 SLPIP03973 132 aa7.8□□□□□ -1.16
HDLBP-239ENST00000483086 CIRBP-AS1Q8TBR5 109 aa7.8□□□□□ -1.16
HDLBP-239ENST00000483086 RNF185Q96GF1 192 aa7.8□□□□□ -1.16
HDLBP-239ENST00000483086 V9GYV3 84 aa7.8□□□□□ -1.16
HDLBP-239ENST00000483086 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
HDLBP-239ENST00000483086 FAM231BA6NCW3 169 aa7.79□□□□□ -1.16
HDLBP-239ENST00000483086 CT83Q5H943 113 aa7.79□□□□□ -1.16
HDLBP-239ENST00000483086 LINC00528Q8N1L1 170 aa7.79□□□□□ -1.16
HDLBP-239ENST00000483086 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
HDLBP-239ENST00000483086 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-239ENST00000483086 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
HDLBP-239ENST00000483086 ZNF727A8MUV8 499 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 HIGD1CA8MV81 97 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 A8MWL6 223 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 FAM229AH3BQW9 127 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 NDUFS6O75380 124 aaKnown RBP7.78□□□□□ -1.16
HDLBP-239ENST00000483086 RPS10P46783 165 aaKnown RBP7.78□□□□□ -1.16
HDLBP-239ENST00000483086 AMTP48728 403 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 PKIAP61925 76 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 COTL1Q14019 142 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 ISOC2Q96AB3 205 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 CHAC1Q9BUX1 264 aa7.78□□□□□ -1.16
HDLBP-239ENST00000483086 SDHAF1A6NFY7 115 aa7.77□□□□□ -1.17
HDLBP-239ENST00000483086 RPL23P62829 140 aaKnown RBP7.77□□□□□ -1.17
HDLBP-239ENST00000483086 TSKUQ8WUA8 353 aa7.77□□□□□ -1.17
HDLBP-239ENST00000483086 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
HDLBP-239ENST00000483086 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
HDLBP-239ENST00000483086 SMKR1H3BMG3 65 aa7.76□□□□□ -1.17
HDLBP-239ENST00000483086 TSHBP01222 138 aa7.76□□□□□ -1.17
HDLBP-239ENST00000483086 AMN1Q8IY45 258 aa7.76□□□□□ -1.17
HDLBP-239ENST00000483086 C9orf163Q8N9P6 203 aa7.76□□□□□ -1.17
HDLBP-239ENST00000483086 NUP35Q8NFH5 326 aa7.76□□□□□ -1.17
HDLBP-239ENST00000483086 TRBV6-5A0A0K0K1A5 114 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 RAB4AP20338 218 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 C14orf177Q52M58 125 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 TEX261Q6UWH6 196 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 SDIM1Q6ZPB5 146 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 C15orf56Q8N910 161 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
HDLBP-239ENST00000483086 IGKV3OR2-268A0A0C4DH90 116 aa7.74□□□□□ -1.17
HDLBP-239ENST00000483086 A0A1B0GUT8 65 aa7.74□□□□□ -1.17
HDLBP-239ENST00000483086 NCR2O95944 276 aa7.74□□□□□ -1.17
HDLBP-239ENST00000483086 ESDP10768 282 aa7.74□□□□□ -1.17
HDLBP-239ENST00000483086 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
HDLBP-239ENST00000483086 TMEM242Q9NWH2 141 aa7.74□□□□□ -1.17
HDLBP-239ENST00000483086 TRAV8-4A0A0B4J246 113 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 GAGE12HA6NDE8 117 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 UBE2L6O14933 153 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 FGF6P10767 208 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 TMEM241Q24JQ0 296 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 NRACQ8N912 160 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 TNXBP22105 4242 aa7.73□□□□□ -1.17
HDLBP-239ENST00000483086 APCSP02743 223 aa7.72□□□□□ -1.17
HDLBP-239ENST00000483086 S100A1P23297 94 aa7.72□□□□□ -1.17
HDLBP-239ENST00000483086 HNRNPA3P51991 378 aaKnown RBP7.72□□□□□ -1.17
HDLBP-239ENST00000483086 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
HDLBP-239ENST00000483086 ADIRFQ15847 76 aa7.72□□□□□ -1.17
HDLBP-239ENST00000483086 SMIM27A0A1W2PRY6 76 aa7.71□□□□□ -1.18
HDLBP-239ENST00000483086 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
HDLBP-239ENST00000483086 I3L3M4 83 aa7.71□□□□□ -1.18
HDLBP-239ENST00000483086 CHTF8P0CG12 524 aa7.71□□□□□ -1.18
HDLBP-239ENST00000483086 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.18
HDLBP-239ENST00000483086 SMIM15Q7Z3B0 74 aa7.71□□□□□ -1.18
HDLBP-239ENST00000483086 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
HDLBP-239ENST00000483086 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
HDLBP-239ENST00000483086 PMCHP20382 165 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 FOXI1Q12951 378 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 CIRBPQ14011 172 aaKnown RBP7.7□□□□□ -1.18
HDLBP-239ENST00000483086 HIGD2BQ4VC39 106 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 CLRN3Q8NCR9 226 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 ST20Q9HBF5 79 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 NAT8Q9UHE5 227 aa7.7□□□□□ -1.18
HDLBP-239ENST00000483086 MRPL51Q4U2R6 128 aaKnown RBP7.69□□□□□ -1.18
HDLBP-239ENST00000483086 FAM74A3Q4VXF1 159 aa7.69□□□□□ -1.18
HDLBP-239ENST00000483086 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
HDLBP-239ENST00000483086 MRAP2Q96G30 205 aa7.69□□□□□ -1.18
HDLBP-239ENST00000483086 H7C423 109 aa7.68□□□□□ -1.18
HDLBP-239ENST00000483086 RIGQ13278 110 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms