RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PMCHP20382 165 aa14.01□□□□□ -0.17
SEC13-217ENST00000482647 RPS10P46783 165 aaKnown RBP14.01□□□□□ -0.17
SEC13-217ENST00000482647 AMTP48728 403 aa14.01□□□□□ -0.17
SEC13-217ENST00000482647 MRPL51Q4U2R6 128 aaKnown RBP14.01□□□□□ -0.17
SEC13-217ENST00000482647 IMMP2LQ96T52 175 aa14.01□□□□□ -0.17
SEC13-217ENST00000482647 SMKR1H3BMG3 65 aa14□□□□□ -0.17
SEC13-217ENST00000482647 EREGO14944 169 aa14□□□□□ -0.17
SEC13-217ENST00000482647 RBX1P62877 108 aa14□□□□□ -0.17
SEC13-217ENST00000482647 C10orf91Q5T1B1 145 aa14□□□□□ -0.17
SEC13-217ENST00000482647 UBE2WQ96B02 151 aa14□□□□□ -0.17
SEC13-217ENST00000482647 TMEM70Q9BUB7 260 aa14□□□□□ -0.17
SEC13-217ENST00000482647 UBE2L6O14933 153 aa13.99□□□□□ -0.17
SEC13-217ENST00000482647 ANGP03950 147 aaKnown RBP13.99□□□□□ -0.17
SEC13-217ENST00000482647 CKS2P33552 79 aa13.99□□□□□ -0.17
SEC13-217ENST00000482647 Q0VG73 95 aa13.99□□□□□ -0.17
SEC13-217ENST00000482647 Q8N976 141 aa13.99□□□□□ -0.17
SEC13-217ENST00000482647 RMI2Q96E14 147 aa13.99□□□□□ -0.17
SEC13-217ENST00000482647 BTF3L4Q96K17 158 aa13.99□□□□□ -0.17
SEC13-217ENST00000482647 APCSP02743 223 aa13.98□□□□□ -0.17
SEC13-217ENST00000482647 NRACQ8N912 160 aa13.98□□□□□ -0.17
SEC13-217ENST00000482647 CARHSP1Q9Y2V2 147 aaKnown RBP13.98□□□□□ -0.17
SEC13-217ENST00000482647 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
SEC13-217ENST00000482647 A0A087WTM6 91 aa13.97□□□□□ -0.17
SEC13-217ENST00000482647 TRBV27A0A0K0K1C4 114 aa13.97□□□□□ -0.17
SEC13-217ENST00000482647 VCYO14598 125 aa13.97□□□□□ -0.17
SEC13-217ENST00000482647 POLR2KP53803 58 aaKnown RBP13.97□□□□□ -0.17
SEC13-217ENST00000482647 DYNC1H1Q14204 4646 aaKnown RBP13.96□□□□□ -0.17
SEC13-217ENST00000482647 A0A1B0GUV1 79 aa13.96□□□□□ -0.17
SEC13-217ENST00000482647 CRPP02741 224 aa13.96□□□□□ -0.17
SEC13-217ENST00000482647 SUMO2P61956 95 aaKnown RBP13.96□□□□□ -0.17
SEC13-217ENST00000482647 SPATA12Q7Z6I5 190 aa13.96□□□□□ -0.17
SEC13-217ENST00000482647 PPBPP02775 128 aa13.95□□□□□ -0.18
SEC13-217ENST00000482647 ENHOQ6UWT2 76 aa13.95□□□□□ -0.18
SEC13-217ENST00000482647 C20orf78Q9BR46 151 aa13.95□□□□□ -0.18
SEC13-217ENST00000482647 TMEM242Q9NWH2 141 aa13.95□□□□□ -0.18
SEC13-217ENST00000482647 TRBV24-1A0A075B6N3 115 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 IGKV2D-24A0A075B6R9 120 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 C7orf77A4D0Y5 90 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 D6R8Y8 96 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 H7C423 109 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 TSHBP01222 138 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
SEC13-217ENST00000482647 RHEBQ15382 184 aa13.93□□□□□ -0.18
SEC13-217ENST00000482647 CLRN3Q8NCR9 226 aa13.93□□□□□ -0.18
SEC13-217ENST00000482647 PRR34Q9NV39 138 aa13.93□□□□□ -0.18
SEC13-217ENST00000482647 TRAV9-1A0A075B6T8 112 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 LRCOL1A6NCL2 159 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 TNFRSF6BO95407 300 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 S100PP25815 95 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 MIAQ16674 131 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 AMMECR1LQ6DCA0 310 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 PGPEP1Q9NXJ5 209 aa13.92□□□□□ -0.18
SEC13-217ENST00000482647 C16orf90A8MZG2 172 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 PHOX2AO14813 284 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 FCER1GP30273 86 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 KRTAP10-2P60368 255 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 NDUFA5Q16718 116 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 TMEM136Q6ZRR5 245 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 ORMDL3Q8N138 153 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 C20orf203Q8NBC4 194 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 KIR2DL4Q99706 377 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 C1orf43Q9BWL3 253 aa13.91□□□□□ -0.18
SEC13-217ENST00000482647 IGLV4-60A0A075B6I1 120 aa13.9□□□□□ -0.18
SEC13-217ENST00000482647 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.9□□□□□ -0.18
SEC13-217ENST00000482647 IGKV2-29A2NJV5 120 aaPredicted RBP13.9□□□□□ -0.18
SEC13-217ENST00000482647 RPL32P62910 135 aaKnown RBP13.9□□□□□ -0.18
SEC13-217ENST00000482647 RPS10P5Q9NQ39 176 aa13.9□□□□□ -0.18
SEC13-217ENST00000482647 APOC3P02656 99 aa13.89□□□□□ -0.19
SEC13-217ENST00000482647 ESDP10768 282 aa13.89□□□□□ -0.19
SEC13-217ENST00000482647 REG3AQ06141 175 aa13.89□□□□□ -0.19
SEC13-217ENST00000482647 RNASEKQ6P5S7 137 aaKnown RBP13.89□□□□□ -0.19
SEC13-217ENST00000482647 FGF6P10767 208 aa13.88□□□□□ -0.19
SEC13-217ENST00000482647 CLPSL2Q6UWE3 100 aa13.88□□□□□ -0.19
SEC13-217ENST00000482647 PRELID3AQ96N28 172 aa13.88□□□□□ -0.19
SEC13-217ENST00000482647 TCAPO15273 167 aa13.87□□□□□ -0.19
SEC13-217ENST00000482647 NPYP01303 97 aa13.87□□□□□ -0.19
SEC13-217ENST00000482647 ZNF25P17030 456 aaPredicted RBP13.87□□□□□ -0.19
SEC13-217ENST00000482647 SVBPQ8N300 66 aa13.87□□□□□ -0.19
SEC13-217ENST00000482647 MAPKAPK5-AS1Q8N8E1 139 aa13.87□□□□□ -0.19
SEC13-217ENST00000482647 CDPF1Q6NVV7 123 aa13.86□□□□□ -0.19
SEC13-217ENST00000482647 BAALCQ8WXS3 180 aa13.86□□□□□ -0.19
SEC13-217ENST00000482647 TMEM101Q96IK0 257 aa13.86□□□□□ -0.19
SEC13-217ENST00000482647 SMIM2Q9BVW6 85 aa13.86□□□□□ -0.19
SEC13-217ENST00000482647 LAMTOR2Q9Y2Q5 125 aa13.86□□□□□ -0.19
SEC13-217ENST00000482647 KIAA1109Q2LD37 5005 aa13.85□□□□□ -0.19
SEC13-217ENST00000482647 TRAV8-4A0A0B4J246 113 aa13.85□□□□□ -0.19
SEC13-217ENST00000482647 SNAPINO95295 136 aa13.85□□□□□ -0.19
SEC13-217ENST00000482647 Q8N814 137 aa13.85□□□□□ -0.19
SEC13-217ENST00000482647 DNAH5Q8TE73 4624 aa13.85□□□□□ -0.19
SEC13-217ENST00000482647 SMAGPQ0VAQ4 97 aa13.84□□□□□ -0.19
SEC13-217ENST00000482647 LRP1BQ9NZR2 4599 aa13.83□□□□□ -0.2
SEC13-217ENST00000482647 LECT2O14960 151 aa13.83□□□□□ -0.2
SEC13-217ENST00000482647 MRPL52Q86TS9 123 aaKnown RBP13.83□□□□□ -0.2
SEC13-217ENST00000482647 OR5A1Q8NGJ0 315 aa13.83□□□□□ -0.2
SEC13-217ENST00000482647 WFDC2Q14508 124 aa13.82□□□□□ -0.2
SEC13-217ENST00000482647 NTN5Q8WTR8 489 aaPredicted RBP13.82□□□□□ -0.2
SEC13-217ENST00000482647 TMEM18Q96B42 140 aa13.82□□□□□ -0.2
SEC13-217ENST00000482647 IGLV10-54A0A075B6I4 117 aa13.81□□□□□ -0.2
SEC13-217ENST00000482647 PRSS47A8MTI9 375 aa13.81□□□□□ -0.2
SEC13-217ENST00000482647 RAB5AP20339 215 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms