RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 EPRSP07814 1512 aaKnown RBP3.37□□□□□ -1.87
RBM39-233ENST00000482563 MLH3Q9UHC1 1453 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 RRBP1Q9P2E9 1410 aaKnown RBP3.37□□□□□ -1.87
RBM39-233ENST00000482563 C10orf142B7Z368 130 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 SPTBP11277 2137 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 NDUFA4L2Q9NRX3 87 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 PLXNA1Q9UIW2 1896 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 DOCK11Q5JSL3 2073 aa3.37□□□□□ -1.87
RBM39-233ENST00000482563 TRBV6-7A0A0A0MS04 114 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 A0A0G2JND7 137 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 NDUFC1O43677 76 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 SSBP1Q04837 148 aaKnown RBP3.36□□□□□ -1.87
RBM39-233ENST00000482563 COX7B2Q8TF08 81 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 PRO1854Q9UHT4 67 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 VWDEQ8N2E2 1590 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 ZNF720Q7Z2F6 126 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 C5orf56Q8N8D9 126 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 HIGD1BQ9P298 99 aa3.36□□□□□ -1.87
RBM39-233ENST00000482563 A0A087WTM6 91 aa3.35□□□□□ -1.87
RBM39-233ENST00000482563 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
RBM39-233ENST00000482563 MED9Q9NWA0 146 aa3.35□□□□□ -1.87
RBM39-233ENST00000482563 RGPD3A6NKT7 1758 aaPredicted RBP3.34□□□□□ -1.87
RBM39-233ENST00000482563 TCHHQ07283 1943 aa3.34□□□□□ -1.87
RBM39-233ENST00000482563 TRGV2A0A075B6R0 118 aa3.34□□□□□ -1.87
RBM39-233ENST00000482563 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
RBM39-233ENST00000482563 DIP2BQ9P265 1576 aa3.34□□□□□ -1.87
RBM39-233ENST00000482563 PLIN4Q96Q06 1357 aa3.34□□□□□ -1.88
RBM39-233ENST00000482563 INTS1Q8N201 2190 aaKnown RBP3.34□□□□□ -1.88
RBM39-233ENST00000482563 TOP2BQ02880 1626 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 EDDM3BP56851 147 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 VMO1Q7Z5L0 202 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 S100A13Q99584 98 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 BAHCC1Q9P281 2608 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 BLMP54132 1417 aaPredicted RBP3.33□□□□□ -1.88
RBM39-233ENST00000482563 IGKV2-40A0A087WW87 121 aaPredicted RBP3.33□□□□□ -1.88
RBM39-233ENST00000482563 IGKV2D-40P01614 121 aaPredicted RBP3.33□□□□□ -1.88
RBM39-233ENST00000482563 C6orf52Q5T4I8 152 aa3.33□□□□□ -1.88
RBM39-233ENST00000482563 DLG5Q8TDM6 1919 aa3.32□□□□□ -1.88
RBM39-233ENST00000482563 HMGN4O00479 90 aa3.32□□□□□ -1.88
RBM39-233ENST00000482563 ELOF1P60002 83 aaKnown RBP3.32□□□□□ -1.88
RBM39-233ENST00000482563 UQCR10Q9UDW1 63 aa3.32□□□□□ -1.88
RBM39-233ENST00000482563 J3QRE1 110 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 XAF1Q6GPH4 301 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 FAM223AQ8IWN6 122 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 OBSCN-AS1Q96MR7 158 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 DYNLRB1Q9NP97 96 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 LENEPQ9Y5L5 61 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 LRRIQ1Q96JM4 1722 aa3.31□□□□□ -1.88
RBM39-233ENST00000482563 PPP1R17O96001 155 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 DEFB103AP81534 67 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 NRXN1Q9ULB1 1477 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 ARHGEF5Q12774 1597 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 EDC4Q6P2E9 1401 aaKnown RBP3.3□□□□□ -1.88
RBM39-233ENST00000482563 PRRC2BQ5JSZ5 2229 aaKnown RBP3.3□□□□□ -1.88
RBM39-233ENST00000482563 MRC1P22897 1456 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 ETDBQ3ZM63 59 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 GDF5OSQ5U4N7 250 aa3.3□□□□□ -1.88
RBM39-233ENST00000482563 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
RBM39-233ENST00000482563 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
RBM39-233ENST00000482563 SPCS1Q9Y6A9 102 aa3.29□□□□□ -1.88
RBM39-233ENST00000482563 LRRC37A3O60309 1634 aa3.29□□□□□ -1.88
RBM39-233ENST00000482563 AFDNP55196 1824 aaKnown RBP3.28□□□□□ -1.88
RBM39-233ENST00000482563 ATP10BO94823 1461 aa3.28□□□□□ -1.88
RBM39-233ENST00000482563 POLA1P09884 1462 aaPredicted RBP3.28□□□□□ -1.88
RBM39-233ENST00000482563 PI4KAP42356 2102 aa3.28□□□□□ -1.88
RBM39-233ENST00000482563 IGKV4-1P06312 121 aa3.27□□□□□ -1.89
RBM39-233ENST00000482563 TMEM14DPA8MWL7 114 aa3.27□□□□□ -1.89
RBM39-233ENST00000482563 WFDC2Q14508 124 aa3.27□□□□□ -1.89
RBM39-233ENST00000482563 PCOTHQ58A44 107 aa3.27□□□□□ -1.89
RBM39-233ENST00000482563 RABAC1Q9UI14 185 aa3.27□□□□□ -1.89
RBM39-233ENST00000482563 KIF14Q15058 1648 aa3.27□□□□□ -1.89
RBM39-233ENST00000482563 MYOM1P52179 1685 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 UBR1Q8IWV7 1749 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 UNC13BO14795 1591 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 SPAG11BQ08648 103 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 SPAG11AQ6PDA7 123 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 CLTCQ00610 1675 aaKnown RBP3.26□□□□□ -1.89
RBM39-233ENST00000482563 HMGXB3Q12766 1538 aa3.26□□□□□ -1.89
RBM39-233ENST00000482563 COX6CP09669 75 aa3.25□□□□□ -1.89
RBM39-233ENST00000482563 NMSQ5H8A3 153 aa3.25□□□□□ -1.89
RBM39-233ENST00000482563 ST20Q9HBF5 79 aa3.25□□□□□ -1.89
RBM39-233ENST00000482563 FANCAO15360 1455 aa3.25□□□□□ -1.89
RBM39-233ENST00000482563 LOC285556D6RIA3 1793 aa3.25□□□□□ -1.89
RBM39-233ENST00000482563 CCDC88BA6NC98 1476 aa3.25□□□□□ -1.89
RBM39-233ENST00000482563 CCL18P55774 89 aa3.24□□□□□ -1.89
RBM39-233ENST00000482563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.24□□□□□ -1.89
RBM39-233ENST00000482563 UNQ6190/PRO20217Q6UXQ8 127 aa3.24□□□□□ -1.89
RBM39-233ENST00000482563 DIP2CQ9Y2E4 1556 aa3.24□□□□□ -1.89
RBM39-233ENST00000482563 SDK1Q7Z5N4 2213 aa3.24□□□□□ -1.89
RBM39-233ENST00000482563 MYO3AQ8NEV4 1616 aa3.23□□□□□ -1.89
RBM39-233ENST00000482563 TRBV25-1A0A075B6N4 114 aa3.23□□□□□ -1.89
RBM39-233ENST00000482563 A0A1W2PPM0 123 aa3.23□□□□□ -1.89
RBM39-233ENST00000482563 EFNA4P52798 201 aa3.23□□□□□ -1.89
RBM39-233ENST00000482563 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms