RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 HRES1P13985 223 aa4.72□□□□□ -1.65
LSM5-210ENST00000480956 CBLN1P23435 193 aa4.72□□□□□ -1.65
LSM5-210ENST00000480956 UBE2G1P62253 170 aa4.72□□□□□ -1.65
LSM5-210ENST00000480956 P0C880 135 aa4.72□□□□□ -1.65
LSM5-210ENST00000480956 TNRC6AQ8NDV7 1962 aaKnown RBP4.71□□□□□ -1.65
LSM5-210ENST00000480956 K7EP34 96 aa4.71□□□□□ -1.66
LSM5-210ENST00000480956 GYPAP02724 150 aa4.71□□□□□ -1.66
LSM5-210ENST00000480956 UNQ5815/PRO19632Q6UWF5 114 aa4.71□□□□□ -1.66
LSM5-210ENST00000480956 F5P12259 2224 aa4.71□□□□□ -1.66
LSM5-210ENST00000480956 CUL9Q8IWT3 2517 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 F8W1H4 67 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 PRB4P10163 310 aaPredicted RBP4.7□□□□□ -1.66
LSM5-210ENST00000480956 POLR2JP52435 117 aaKnown RBP4.7□□□□□ -1.66
LSM5-210ENST00000480956 RHOHQ15669 191 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 SLC48A1Q6P1K1 146 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 C15orf53Q8NAA6 179 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 VPS13AQ96RL7 3174 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 NUMA1Q14980 2115 aa4.7□□□□□ -1.66
LSM5-210ENST00000480956 CCKP06307 115 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 Q1T7F1 81 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 DEFB134Q4QY38 66 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 Q6ZTI0 123 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 ZNF431Q8TF32 576 aaPredicted RBP4.69□□□□□ -1.66
LSM5-210ENST00000480956 PPDPFLQ8WWR9 84 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 S100A13Q99584 98 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 CACNA1DQ01668 2161 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 C9orf116Q5BN46 136 aaPredicted RBP4.69□□□□□ -1.66
LSM5-210ENST00000480956 ZNF833PQ6ZTB9 187 aa4.69□□□□□ -1.66
LSM5-210ENST00000480956 CHD3Q12873 2000 aaKnown RBP4.68□□□□□ -1.66
LSM5-210ENST00000480956 LAMA1P25391 3075 aa4.68□□□□□ -1.66
LSM5-210ENST00000480956 IGKV1D-17A0A075B6S4 117 aa4.68□□□□□ -1.66
LSM5-210ENST00000480956 A0A0G2JND7 137 aa4.68□□□□□ -1.66
LSM5-210ENST00000480956 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
LSM5-210ENST00000480956 SPINK14Q6IE38 97 aa4.68□□□□□ -1.66
LSM5-210ENST00000480956 SPEGQ15772 3267 aa4.68□□□□□ -1.66
LSM5-210ENST00000480956 BDP1A6H8Y1 2624 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 CYB5AP00167 134 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 IGKCP01834 107 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 SLC25A6P12236 298 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 MRPL35Q9NZE8 188 aaKnown RBP4.67□□□□□ -1.66
LSM5-210ENST00000480956 SDK2Q58EX2 2172 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 FRYLO94915 3013 aa4.67□□□□□ -1.66
LSM5-210ENST00000480956 WDR87Q6ZQQ6 2873 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 NMBP08949 121 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 EML5Q05BV3 1969 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 LOC730098B7Z3J9 87 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 CTSGP08311 255 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 MT3P25713 68 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 KRTDAPP60985 99 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 DEFB119Q8N690 84 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 SPTSSBQ8NFR3 76 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 CMTM2Q8TAZ6 248 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 TP53TG3Q9ULZ0 132 aa4.66□□□□□ -1.66
LSM5-210ENST00000480956 PLXNA2O75051 1894 aa4.65□□□□□ -1.66
LSM5-210ENST00000480956 SDK1Q7Z5N4 2213 aa4.65□□□□□ -1.66
LSM5-210ENST00000480956 LOC285095A0A1B0GVY8 99 aa4.65□□□□□ -1.67
LSM5-210ENST00000480956 KRTAP26-1Q6PEX3 210 aa4.65□□□□□ -1.67
LSM5-210ENST00000480956 ATOX1O00244 68 aa4.64□□□□□ -1.67
LSM5-210ENST00000480956 MRPS14O60783 128 aaKnown RBP4.64□□□□□ -1.67
LSM5-210ENST00000480956 TSLPQ969D9 159 aa4.64□□□□□ -1.67
LSM5-210ENST00000480956 HEATR5BQ9P2D3 2071 aa4.64□□□□□ -1.67
LSM5-210ENST00000480956 CEP192Q8TEP8 1941 aa4.64□□□□□ -1.67
LSM5-210ENST00000480956 SNRNP200O75643 2136 aaKnown RBP4.64□□□□□ -1.67
LSM5-210ENST00000480956 FREM3P0C091 2139 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 PDE6HQ13956 83 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 TDRG1Q3Y452 100 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.63□□□□□ -1.67
LSM5-210ENST00000480956 MYOZ3Q8TDC0 251 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 TTC28Q96AY4 2481 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 ZDBF2Q9HCK1 2354 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 NCOR1O75376 2440 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 TECTAO75443 2155 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 FAUP35544 74 aaKnown RBP4.63□□□□□ -1.67
LSM5-210ENST00000480956 LYPD1Q8N2G4 141 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 OR10AG1Q8NH19 301 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 LINC00052Q96N35 136 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 SMAD5-AS1Q9Y6J3 95 aa4.63□□□□□ -1.67
LSM5-210ENST00000480956 CGAP01215 116 aa4.62□□□□□ -1.67
LSM5-210ENST00000480956 S100A16Q96FQ6 103 aaKnown RBP4.62□□□□□ -1.67
LSM5-210ENST00000480956 PRR34Q9NV39 138 aa4.62□□□□□ -1.67
LSM5-210ENST00000480956 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 TRBV10-3A0A0K0K1G6 114 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 NAP1L6A6NFF2 107 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 SPINT3P49223 89 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 CCL8P80075 99 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 ALKAL2Q6UX46 152 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 DEFB107AQ8IZN7 70 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 MGST2Q99735 147 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 C20orf78Q9BR46 151 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 KRTAP1-5Q9BYS1 174 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 LINC00474Q9P2X8 69 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 ADAMTS9Q9P2N4 1935 aa4.61□□□□□ -1.67
LSM5-210ENST00000480956 TRAV13-2A0A0B4J235 113 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 SFT2D2O95562 160 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 ELOBQ15370 118 aa4.6□□□□□ -1.67
LSM5-210ENST00000480956 UQCR10Q9UDW1 63 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms