RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SVIPQ8NHG7 77 aa7.35□□□□□ -1.23
VEGFA-212ENST00000480614 NDUFV3P56181 108 aaKnown RBP7.34□□□□□ -1.23
VEGFA-212ENST00000480614 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 FAM167A-AS1Q96KT0 104 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 WI2-2373I1.2A0A1W2PRP0 233 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 TRAV26-1A0A087WT03 109 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 PRO0255Q9UI72 69 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 LINC00643Q86TS7 51 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 TEX22C9J3V5 150 aa7.34□□□□□ -1.23
VEGFA-212ENST00000480614 USP17L23D6RBM5 183 aa7.33□□□□□ -1.24
VEGFA-212ENST00000480614 SPRY2O43597 315 aa7.33□□□□□ -1.24
VEGFA-212ENST00000480614 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
VEGFA-212ENST00000480614 MDFICQ9P1T7 246 aa7.33□□□□□ -1.24
VEGFA-212ENST00000480614 KLK12Q9UKR0 248 aa7.33□□□□□ -1.24
VEGFA-212ENST00000480614 COL4A4P53420 1690 aaPredicted RBP7.33□□□□□ -1.24
VEGFA-212ENST00000480614 Q6ZUT4 128 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 ARTNQ5T4W7 220 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 Q8N9W7 124 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 GTSF1Q8WW33 167 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 ODF1Q14990 250 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 ANKRD39Q53RE8 183 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 SPATA12Q7Z6I5 190 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 FAM110AQ9BQ89 295 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 LYRM9A8MSI8 78 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 SPANXB1Q9NS25 103 aaPredicted RBP7.32□□□□□ -1.24
VEGFA-212ENST00000480614 V9GYY9 64 aa7.32□□□□□ -1.24
VEGFA-212ENST00000480614 RNF138Q8WVD3 245 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 FXYD2P54710 66 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 MGAM2Q2M2H8 2515 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 RPL39P62891 51 aaKnown RBP7.31□□□□□ -1.24
VEGFA-212ENST00000480614 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 WISP1O95388 367 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 C11orf45Q8TAV5 145 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 A0A0J9YX75 114 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 DAND5Q8N907 189 aa7.31□□□□□ -1.24
VEGFA-212ENST00000480614 BLCAPP62952 87 aa7.3□□□□□ -1.24
VEGFA-212ENST00000480614 A0A0J9YXY3 114 aa7.3□□□□□ -1.24
VEGFA-212ENST00000480614 PRB1P04280 392 aa7.3□□□□□ -1.24
VEGFA-212ENST00000480614 NDUFC1O43677 76 aa7.3□□□□□ -1.24
VEGFA-212ENST00000480614 UQCRQO14949 82 aa7.3□□□□□ -1.24
VEGFA-212ENST00000480614 C20orf203Q8NBC4 194 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 NDUFA11Q86Y39 141 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 MSRB1Q9NZV6 116 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 HIST2H2BDQ6DRA6 164 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 Q6ZSR3 168 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
VEGFA-212ENST00000480614 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 CENPEQ02224 2701 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 FBXL19-AS1Q494R0 122 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 ASPHD1Q5U4P2 390 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 PATE2Q6UY27 113 aa7.29□□□□□ -1.24
VEGFA-212ENST00000480614 WFDC2Q14508 124 aa7.28□□□□□ -1.24
VEGFA-212ENST00000480614 RNF183Q96D59 192 aa7.28□□□□□ -1.24
VEGFA-212ENST00000480614 CRYGDP07320 174 aa7.27□□□□□ -1.25
VEGFA-212ENST00000480614 TDRG1Q3Y452 100 aa7.27□□□□□ -1.25
VEGFA-212ENST00000480614 RITA1Q96K30 269 aa7.27□□□□□ -1.25
VEGFA-212ENST00000480614 HILS1P60008 231 aa7.27□□□□□ -1.25
VEGFA-212ENST00000480614 ZNF706Q9Y5V0 76 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-212ENST00000480614 C19orf71A6NCJ1 209 aa7.27□□□□□ -1.25
VEGFA-212ENST00000480614 LOXL1Q08397 574 aaPredicted RBP7.27□□□□□ -1.25
VEGFA-212ENST00000480614 NFE4Q86UQ8 179 aa7.27□□□□□ -1.25
VEGFA-212ENST00000480614 IBA57-AS1B1ANH7 110 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 MRPL55Q7Z7F7 128 aaKnown RBP7.26□□□□□ -1.25
VEGFA-212ENST00000480614 TNFRSF13BO14836 293 aaPredicted RBP7.26□□□□□ -1.25
VEGFA-212ENST00000480614 IGLV1-47P01700 117 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 RBX1P62877 108 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 REG3AQ06141 175 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 C3orf22Q8N5N4 141 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 IGKV2D-26A0A0A0MRZ7 120 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 DNAJC9-AS1A6NH13 148 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 FSTL3O95633 263 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 MAP6D1Q9H9H5 199 aa7.26□□□□□ -1.25
VEGFA-212ENST00000480614 NDUFC2-KCTD14E9PQ53 114 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 LINC00574Q9H8X3 128 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 SPRY4Q9C004 299 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 PRAC2D3DTV9 90 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 PRB2P02812 416 aaPredicted RBP7.25□□□□□ -1.25
VEGFA-212ENST00000480614 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 A6NDX4 124 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
VEGFA-212ENST00000480614 A0A1B0GXF2 115 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 ZNF524Q96C55 264 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 DHRS4-AS1Q9P1J3 65 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 LRRC75A-AS1Q8N1F1 130 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 COL27A1Q8IZC6 1860 aaPredicted RBP7.24□□□□□ -1.25
VEGFA-212ENST00000480614 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 SIRPDQ9H106 197 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 ZFP36P26651 326 aaKnown RBP7.24□□□□□ -1.25
VEGFA-212ENST00000480614 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
VEGFA-212ENST00000480614 LINC01548A6NM66 108 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 A0A087WZ39 114 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 NDUFA7O95182 113 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 MIFP14174 115 aa7.23□□□□□ -1.25
VEGFA-212ENST00000480614 P0DMU3 169 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms