RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 TEX261Q6UWH6 196 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 SPINK6Q6UWN8 80 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 LYPD6BQ8NI32 183 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 SMIM12Q96EX1 92 aa7.07□□□□□ -1.28
TTC28-206ENST00000480563 EIF5A2Q9GZV4 153 aaKnown RBP7.07□□□□□ -1.28
TTC28-206ENST00000480563 F5H697 171 aa7.06□□□□□ -1.28
TTC28-206ENST00000480563 RAB14P61106 215 aa7.06□□□□□ -1.28
TTC28-206ENST00000480563 ZNF674Q2M3X9 581 aa7.06□□□□□ -1.28
TTC28-206ENST00000480563 CENPWQ5EE01 88 aa7.06□□□□□ -1.28
TTC28-206ENST00000480563 C20orf203Q8NBC4 194 aa7.06□□□□□ -1.28
TTC28-206ENST00000480563 IGHV1-24A0A0C4DH33 117 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 IGKV2-24A0A0C4DH68 120 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 MUC21A0A0G2JKD1 596 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 TMEM250H0YL14 139 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 GZMBP10144 247 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 IQCJQ1A5X6 159 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 STPG4Q8N801 248 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 PRSS3P2Q8NHM4 247 aa7.05□□□□□ -1.28
TTC28-206ENST00000480563 NDUFS6O75380 124 aaKnown RBP7.04□□□□□ -1.28
TTC28-206ENST00000480563 RPS10P46783 165 aaKnown RBP7.04□□□□□ -1.28
TTC28-206ENST00000480563 CEBPGP53567 150 aa7.04□□□□□ -1.28
TTC28-206ENST00000480563 SRSF9Q13242 221 aaKnown RBP eCLIP7.04□□□□□ -1.28
TTC28-206ENST00000480563 FAM210AQ96ND0 272 aa7.04□□□□□ -1.28
TTC28-206ENST00000480563 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
TTC28-206ENST00000480563 IGLV4-60A0A075B6I1 120 aa7.03□□□□□ -1.28
TTC28-206ENST00000480563 MUC21A0A140T8X8 626 aa7.03□□□□□ -1.28
TTC28-206ENST00000480563 CFAP161Q6P656 301 aa7.03□□□□□ -1.28
TTC28-206ENST00000480563 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
TTC28-206ENST00000480563 A0A1B0GUV1 79 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 XKRY2A2RUG3 117 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 CXCL1P09341 107 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.29
TTC28-206ENST00000480563 SSTP61278 116 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 PEA15Q15121 130 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
TTC28-206ENST00000480563 RAB19A4D1S5 217 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 GAGE12HA6NDE8 117 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 SMIM17P0DL12 118 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 SMIM7Q9BQ49 75 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
TTC28-206ENST00000480563 SMDT1Q9H4I9 107 aa7.01□□□□□ -1.29
TTC28-206ENST00000480563 LPAP08519 4548 aa7□□□□□ -1.29
TTC28-206ENST00000480563 A0A096LNI7 61 aa7□□□□□ -1.29
TTC28-206ENST00000480563 SNAI2O43623 268 aa7□□□□□ -1.29
TTC28-206ENST00000480563 TMEM243Q9BU79 118 aa7□□□□□ -1.29
TTC28-206ENST00000480563 ZNF727A8MUV8 499 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 H7C1H1 209 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 M0QY20 66 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 FAM74A3Q4VXF1 159 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 Q6ZRP5 223 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 OR2D3Q8NGH3 330 aa6.99□□□□□ -1.29
TTC28-206ENST00000480563 SRP19P09132 144 aaKnown RBP6.98□□□□□ -1.29
TTC28-206ENST00000480563 AP1S3Q96PC3 154 aa6.98□□□□□ -1.29
TTC28-206ENST00000480563 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
TTC28-206ENST00000480563 TRBV20OR9-2A0A075B6H5 130 aa6.97□□□□□ -1.29
TTC28-206ENST00000480563 IGKV3OR2-268A0A0C4DH90 116 aa6.97□□□□□ -1.29
TTC28-206ENST00000480563 FAM231BA6NCW3 169 aa6.97□□□□□ -1.29
TTC28-206ENST00000480563 UBE2L6O14933 153 aa6.97□□□□□ -1.29
TTC28-206ENST00000480563 MGPP08493 103 aa6.97□□□□□ -1.29
TTC28-206ENST00000480563 TPPP3Q9BW30 176 aa6.97□□□□□ -1.29
TTC28-206ENST00000480563 RPP21Q9H633 154 aaKnown RBP6.97□□□□□ -1.29
TTC28-206ENST00000480563 GVQW2A0A096LPI5 108 aaPredicted RBP6.96□□□□□ -1.3
TTC28-206ENST00000480563 C19orf71A6NCJ1 209 aa6.96□□□□□ -1.3
TTC28-206ENST00000480563 CACNG7P62955 275 aa6.96□□□□□ -1.3
TTC28-206ENST00000480563 CLLU1Q5K131 121 aa6.96□□□□□ -1.3
TTC28-206ENST00000480563 SUMO4Q6EEV6 95 aa6.96□□□□□ -1.3
TTC28-206ENST00000480563 FER1L6-AS1Q8NA97 138 aa6.96□□□□□ -1.3
TTC28-206ENST00000480563 MUC2Q02817 5179 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 GATCO43716 136 aaKnown RBP6.95□□□□□ -1.3
TTC28-206ENST00000480563 AMTP48728 403 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 RASL11AQ6T310 242 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 FAM231DQ6ZW35 169 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 OCC1Q8TAD7 63 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 CHCHD10Q8WYQ3 142 aaPredicted RBP6.95□□□□□ -1.3
TTC28-206ENST00000480563 BORCS7Q96B45 105 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 NAT8Q9UHE5 227 aa6.95□□□□□ -1.3
TTC28-206ENST00000480563 F2Z2F3 143 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 K7EN84 100 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 ADIRFQ15847 76 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 CT83Q5H943 113 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 RNASE7Q9H1E1 156 aaKnown RBP6.94□□□□□ -1.3
TTC28-206ENST00000480563 PKIGQ9Y2B9 76 aa6.94□□□□□ -1.3
TTC28-206ENST00000480563 A8MWL6 223 aa6.93□□□□□ -1.3
TTC28-206ENST00000480563 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
TTC28-206ENST00000480563 COTL1Q14019 142 aa6.93□□□□□ -1.3
TTC28-206ENST00000480563 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
TTC28-206ENST00000480563 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
TTC28-206ENST00000480563 IGLC6P0CF74 106 aa6.92□□□□□ -1.3
TTC28-206ENST00000480563 FOXI1Q12951 378 aa6.92□□□□□ -1.3
TTC28-206ENST00000480563 UQCC3Q6UW78 93 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms