RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 KLHL30-AS1Q8NEE0 82 aa12.44□□□□□ -0.42
SH3D21-203ENST00000480549 GNRH2O43555 120 aa12.43□□□□□ -0.42
SH3D21-203ENST00000480549 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
SH3D21-203ENST00000480549 PLNP26678 52 aa12.43□□□□□ -0.42
SH3D21-203ENST00000480549 EMP1P54849 157 aa12.43□□□□□ -0.42
SH3D21-203ENST00000480549 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
SH3D21-203ENST00000480549 SPRY2O43597 315 aa12.43□□□□□ -0.42
SH3D21-203ENST00000480549 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
SH3D21-203ENST00000480549 CD7P09564 240 aa12.42□□□□□ -0.42
SH3D21-203ENST00000480549 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
SH3D21-203ENST00000480549 KLK5Q9Y337 293 aaPredicted RBP12.42□□□□□ -0.42
SH3D21-203ENST00000480549 ZNF56Q15929 161 aa12.42□□□□□ -0.42
SH3D21-203ENST00000480549 NF1P21359 2839 aa12.42□□□□□ -0.42
SH3D21-203ENST00000480549 LINC01546A6NGU7 62 aa12.41□□□□□ -0.42
SH3D21-203ENST00000480549 S100A4P26447 101 aaKnown RBP12.41□□□□□ -0.42
SH3D21-203ENST00000480549 C9orf153Q5TBE3 101 aa12.41□□□□□ -0.42
SH3D21-203ENST00000480549 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
SH3D21-203ENST00000480549 ACANP16112 2415 aa12.41□□□□□ -0.42
SH3D21-203ENST00000480549 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
SH3D21-203ENST00000480549 M0R381 172 aa12.4□□□□□ -0.42
SH3D21-203ENST00000480549 C10orf126Q8N4M7 172 aa12.4□□□□□ -0.42
SH3D21-203ENST00000480549 NRACQ8N912 160 aa12.4□□□□□ -0.42
SH3D21-203ENST00000480549 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
SH3D21-203ENST00000480549 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
SH3D21-203ENST00000480549 MUC4Q99102 2169 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 TRAV26-2A0A0B4J265 109 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 F8VRH5 84 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 H7C1H1 209 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 DUSP14O95147 198 aaKnown RBP12.39□□□□□ -0.43
SH3D21-203ENST00000480549 RNASE1P07998 156 aaKnown RBP12.39□□□□□ -0.43
SH3D21-203ENST00000480549 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 CFC1P0CG37 223 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 PHLDA3Q9Y5J5 127 aa12.39□□□□□ -0.43
SH3D21-203ENST00000480549 Q8N8P6 123 aa12.38□□□□□ -0.43
SH3D21-203ENST00000480549 TRAV12-2A0A075B6T6 113 aa12.38□□□□□ -0.43
SH3D21-203ENST00000480549 NXPH4O95158 308 aa12.38□□□□□ -0.43
SH3D21-203ENST00000480549 TMEM61Q8N0U2 210 aa12.38□□□□□ -0.43
SH3D21-203ENST00000480549 IGLV2-18A0A075B6J9 118 aa12.38□□□□□ -0.43
SH3D21-203ENST00000480549 CD28P10747 220 aa12.37□□□□□ -0.43
SH3D21-203ENST00000480549 HERVK_113P63121 156 aa12.37□□□□□ -0.43
SH3D21-203ENST00000480549 LAGE3Q14657 143 aa12.37□□□□□ -0.43
SH3D21-203ENST00000480549 SPINK13Q1W4C9 94 aa12.37□□□□□ -0.43
SH3D21-203ENST00000480549 C11orf44Q8N8P7 122 aa12.37□□□□□ -0.43
SH3D21-203ENST00000480549 C16orf95Q9H693 158 aa12.37□□□□□ -0.43
SH3D21-203ENST00000480549 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 LINC01006Q8NI28 216 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 SMR3AQ99954 134 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 PRO1854Q9UHT4 67 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 FASNP49327 2511 aaKnown RBP12.36□□□□□ -0.43
SH3D21-203ENST00000480549 J3KT08 172 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 NDUFA7O95182 113 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 DPH3P1Q9H4G8 78 aa12.36□□□□□ -0.43
SH3D21-203ENST00000480549 C14orf178Q8N769 122 aaPredicted RBP12.35□□□□□ -0.43
SH3D21-203ENST00000480549 DEFB131AP59861 70 aa12.35□□□□□ -0.43
SH3D21-203ENST00000480549 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
SH3D21-203ENST00000480549 SORL1Q92673 2214 aa12.35□□□□□ -0.43
SH3D21-203ENST00000480549 KNCNA6PVL3 124 aa12.34□□□□□ -0.43
SH3D21-203ENST00000480549 A8MTW9 85 aa12.34□□□□□ -0.43
SH3D21-203ENST00000480549 TMEM101Q96IK0 257 aa12.34□□□□□ -0.43
SH3D21-203ENST00000480549 BAALCQ8WXS3 180 aa12.34□□□□□ -0.43
SH3D21-203ENST00000480549 TRGV11A0A075B6L2 103 aa12.34□□□□□ -0.43
SH3D21-203ENST00000480549 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
SH3D21-203ENST00000480549 CITED2Q99967 270 aaPredicted RBP12.34□□□□□ -0.43
SH3D21-203ENST00000480549 IGHV3-16A0A0C4DH30 117 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 H3BMM0 161 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 HILS1P60008 231 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 CEMP1Q6PRD7 247 aaPredicted RBP12.33□□□□□ -0.44
SH3D21-203ENST00000480549 DYNLRB2Q8TF09 96 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 UBE2WQ96B02 151 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 Q1RN00 199 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 C9orf85Q96MD7 179 aa12.33□□□□□ -0.44
SH3D21-203ENST00000480549 WIPF1O43516 503 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 PMVKQ15126 192 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 SCGB3A1Q96QR1 104 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 CCL24O00175 119 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 RBMY1BA6NDE4 496 aaKnown RBP12.32□□□□□ -0.44
SH3D21-203ENST00000480549 RBMY1EA6NEQ0 496 aaKnown RBP12.32□□□□□ -0.44
SH3D21-203ENST00000480549 RBMY1DP0C7P1 496 aaKnown RBP12.32□□□□□ -0.44
SH3D21-203ENST00000480549 RBMY1A1P0DJD3 496 aaKnown RBP12.32□□□□□ -0.44
SH3D21-203ENST00000480549 RBMY1CP0DJD4 496 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 LINC00315P59091 139 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
SH3D21-203ENST00000480549 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
SH3D21-203ENST00000480549 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
SH3D21-203ENST00000480549 OR13C6PQ8NH95 151 aa12.31□□□□□ -0.44
SH3D21-203ENST00000480549 ZNF256Q9Y2P7 627 aaPredicted RBP12.31□□□□□ -0.44
SH3D21-203ENST00000480549 A0A0J9YY99 117 aa12.3□□□□□ -0.44
SH3D21-203ENST00000480549 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
SH3D21-203ENST00000480549 HECTD1Q9ULT8 2610 aa12.3□□□□□ -0.44
SH3D21-203ENST00000480549 MGPP08493 103 aa12.3□□□□□ -0.44
SH3D21-203ENST00000480549 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
SH3D21-203ENST00000480549 JPT2Q9H910 190 aa12.3□□□□□ -0.44
SH3D21-203ENST00000480549 HERVK_113P61574 105 aa12.3□□□□□ -0.44
SH3D21-203ENST00000480549 MTORP42345 2549 aa12.29□□□□□ -0.44
SH3D21-203ENST00000480549 IGHV3-30P01768 117 aa12.29□□□□□ -0.44
SH3D21-203ENST00000480549 IGHV3-30-5P0DP03 117 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms