RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
TRA2B-212ENST00000480461 GNB1LQ9BYB4 327 aa8.28□□□□□ -1.08
TRA2B-212ENST00000480461 ST20Q9HBF5 79 aa8.28□□□□□ -1.08
TRA2B-212ENST00000480461 TRAV8-6A0A0B4J262 113 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 PRSS29PA6NIE9 313 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 SCO1O75880 301 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 TSHBP01222 138 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 IQCJQ1A5X6 159 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 NIT1Q86X76 327 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 HERC1Q15751 4861 aa8.27□□□□□ -1.09
TRA2B-212ENST00000480461 APCSP02743 223 aa8.26□□□□□ -1.09
TRA2B-212ENST00000480461 PPBPP02775 128 aa8.26□□□□□ -1.09
TRA2B-212ENST00000480461 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
TRA2B-212ENST00000480461 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
TRA2B-212ENST00000480461 PRELID3AQ96N28 172 aa8.26□□□□□ -1.09
TRA2B-212ENST00000480461 SMCO4Q9NRQ5 59 aa8.26□□□□□ -1.09
TRA2B-212ENST00000480461 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 I3L3M4 83 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 VCYO14598 125 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 RTL8CO15255 209 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 IGHV3-30P01768 117 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 IGHV3-33P01772 117 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 IGHV3-30-5P0DP03 117 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 PMCHP20382 165 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 LINC01556Q5JQF7 62 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 C20orf78Q9BR46 151 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
TRA2B-212ENST00000480461 IGHV1-24A0A0C4DH33 117 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 COLCA2A8K830 154 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 PPP1R17O96001 155 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 HLA-DQA1P01909 254 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 ESDP10768 282 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
TRA2B-212ENST00000480461 GAGE6Q13070 117 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 COTL1Q14019 142 aa8.24□□□□□ -1.09
TRA2B-212ENST00000480461 MRPL18Q9H0U6 180 aaKnown RBP8.24□□□□□ -1.09
TRA2B-212ENST00000480461 TRBV25-1A0A075B6N4 114 aa8.23□□□□□ -1.09
TRA2B-212ENST00000480461 PHOX2AO14813 284 aa8.23□□□□□ -1.09
TRA2B-212ENST00000480461 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
TRA2B-212ENST00000480461 Q8N976 141 aa8.23□□□□□ -1.09
TRA2B-212ENST00000480461 CHCHD5Q9BSY4 110 aa8.23□□□□□ -1.09
TRA2B-212ENST00000480461 ALKBH7Q9BT30 221 aaPredicted RBP8.23□□□□□ -1.09
TRA2B-212ENST00000480461 LOC389332A0A1B0GUA5 103 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 IBA57-AS1B1ANH7 110 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 TMEM262E9PQX1 116 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 AMTP48728 403 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 FABP9Q0Z7S8 132 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 COX19Q49B96 90 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 MPV17L2Q567V2 206 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-212ENST00000480461 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 SMIM2Q9BVW6 85 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
TRA2B-212ENST00000480461 IGLV4-60A0A075B6I1 120 aa8.21□□□□□ -1.1
TRA2B-212ENST00000480461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.1
TRA2B-212ENST00000480461 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.1
TRA2B-212ENST00000480461 TCAPO15273 167 aa8.21□□□□□ -1.1
TRA2B-212ENST00000480461 ATP6V1G1O75348 118 aa8.21□□□□□ -1.1
TRA2B-212ENST00000480461 MT-ND6P03923 174 aa8.21□□□□□ -1.1
TRA2B-212ENST00000480461 RBX1P62877 108 aa8.21□□□□□ -1.1
TRA2B-212ENST00000480461 Q6ZRN7 208 aaPredicted RBP8.2□□□□□ -1.1
TRA2B-212ENST00000480461 C20orf203Q8NBC4 194 aa8.2□□□□□ -1.1
TRA2B-212ENST00000480461 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
TRA2B-212ENST00000480461 LAMTOR2Q9Y2Q5 125 aa8.2□□□□□ -1.1
TRA2B-212ENST00000480461 TRAV9-2A0A087WT02 112 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 A0A087WX48 190 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 IFI27P40305 119 aaPredicted RBP8.19□□□□□ -1.1
TRA2B-212ENST00000480461 TTC32Q5I0X7 151 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 C1orf134Q5TEV5 83 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 ENHOQ6UWT2 76 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 C6orf223Q8N319 242 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 Q8N8P6 123 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 LRP1BQ9NZR2 4599 aa8.19□□□□□ -1.1
TRA2B-212ENST00000480461 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
TRA2B-212ENST00000480461 K7EP13 123 aa8.18□□□□□ -1.1
TRA2B-212ENST00000480461 FCER1GP30273 86 aa8.18□□□□□ -1.1
TRA2B-212ENST00000480461 MAPKAPK5-AS1Q8N8E1 139 aa8.18□□□□□ -1.1
TRA2B-212ENST00000480461 KIR2DL4Q99706 377 aa8.18□□□□□ -1.1
TRA2B-212ENST00000480461 MAP1LC3AQ9H492 121 aa8.18□□□□□ -1.1
TRA2B-212ENST00000480461 FGF6P10767 208 aa8.17□□□□□ -1.1
TRA2B-212ENST00000480461 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
TRA2B-212ENST00000480461 LINC00269Q8N2A0 174 aa8.17□□□□□ -1.1
TRA2B-212ENST00000480461 URB1-AS1Q96HZ7 61 aa8.17□□□□□ -1.1
TRA2B-212ENST00000480461 H7C423 109 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 LCE2BO14633 110 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 CDK2AP2O75956 126 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 ANGP03950 147 aaKnown RBP8.16□□□□□ -1.1
TRA2B-212ENST00000480461 TRGC2P03986 189 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 RAB5AP20339 215 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 S100A1P23297 94 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 C18orf32Q8TCD1 76 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 Q9HAA7 133 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 PRR34Q9NV39 138 aa8.16□□□□□ -1.1
TRA2B-212ENST00000480461 APOBP04114 4563 aaKnown RBP8.15□□□□□ -1.1
TRA2B-212ENST00000480461 LINC01546A6NGU7 62 aa8.15□□□□□ -1.1
TRA2B-212ENST00000480461 TNP2Q05952 138 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms