RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 NFE4Q86UQ8 179 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 ESM1Q9NQ30 184 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 Q6ZSN1 163 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 RAX2Q96IS3 184 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
PKD1-213ENST00000480227 TRAV2A0A0B4J234 112 aa12.47□□□□□ -0.41
PKD1-213ENST00000480227 CD28P10747 220 aa12.47□□□□□ -0.41
PKD1-213ENST00000480227 AMELXQ99217 191 aa12.47□□□□□ -0.41
PKD1-213ENST00000480227 FASNP49327 2511 aaKnown RBP12.46□□□□□ -0.41
PKD1-213ENST00000480227 TMEM223A0PJW6 202 aa12.46□□□□□ -0.41
PKD1-213ENST00000480227 UBE2D1P51668 147 aa12.46□□□□□ -0.41
PKD1-213ENST00000480227 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
PKD1-213ENST00000480227 RNASE13Q5GAN3 156 aaKnown RBP12.46□□□□□ -0.41
PKD1-213ENST00000480227 A8MWV9 139 aa12.45□□□□□ -0.42
PKD1-213ENST00000480227 F8W1H4 67 aa12.45□□□□□ -0.42
PKD1-213ENST00000480227 ZNF22P17026 224 aaPredicted RBP12.45□□□□□ -0.42
PKD1-213ENST00000480227 SLC25A29Q8N8R3 303 aa12.45□□□□□ -0.42
PKD1-213ENST00000480227 RHODO00212 210 aa12.45□□□□□ -0.42
PKD1-213ENST00000480227 TMEM86BQ8N661 226 aa12.45□□□□□ -0.42
PKD1-213ENST00000480227 ODF3L2Q3SX64 289 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 CFAP126Q5VTH2 177 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 C11orf72Q8NBR9 251 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 XCL2Q9UBD3 114 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 IGHV3-30P01768 117 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 IGHV3-30-5P0DP03 117 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 SH2D6Q7Z4S9 175 aa12.44□□□□□ -0.42
PKD1-213ENST00000480227 LOC107984156A0A0G2JMH3 177 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 TSPAN13O95857 204 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 ARL17AQ8IVW1 177 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 LEPROTO15243 131 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 ETDBQ3ZM63 59 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 FAM104AQ969W3 186 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 SPXQ9BT56 116 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 EDA2RQ9HAV5 297 aa12.43□□□□□ -0.42
PKD1-213ENST00000480227 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
PKD1-213ENST00000480227 INSP01308 110 aa12.42□□□□□ -0.42
PKD1-213ENST00000480227 NDUFA11Q86Y39 141 aa12.42□□□□□ -0.42
PKD1-213ENST00000480227 SPANXB1Q9NS25 103 aaPredicted RBP12.42□□□□□ -0.42
PKD1-213ENST00000480227 C2CD3Q4AC94 2353 aa12.42□□□□□ -0.42
PKD1-213ENST00000480227 AZU1P20160 251 aa12.42□□□□□ -0.42
PKD1-213ENST00000480227 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.41□□□□□ -0.42
PKD1-213ENST00000480227 IGKV2-29A2NJV5 120 aaPredicted RBP12.41□□□□□ -0.42
PKD1-213ENST00000480227 CCL24O00175 119 aa12.41□□□□□ -0.42
PKD1-213ENST00000480227 CFC1BP0CG36 223 aa12.41□□□□□ -0.42
PKD1-213ENST00000480227 CFC1P0CG37 223 aa12.41□□□□□ -0.42
PKD1-213ENST00000480227 PYGO1Q9Y3Y4 419 aa12.41□□□□□ -0.42
PKD1-213ENST00000480227 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
PKD1-213ENST00000480227 PRO0461Q9UI25 63 aa12.4□□□□□ -0.42
PKD1-213ENST00000480227 ADARB2-AS1A8MUL3 147 aa12.4□□□□□ -0.43
PKD1-213ENST00000480227 FHL3Q13643 280 aa12.4□□□□□ -0.43
PKD1-213ENST00000480227 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
PKD1-213ENST00000480227 PSMB2P49721 201 aa12.39□□□□□ -0.43
PKD1-213ENST00000480227 CHCHD7Q9BUK0 85 aa12.39□□□□□ -0.43
PKD1-213ENST00000480227 STHQ8IWL8 128 aa12.38□□□□□ -0.43
PKD1-213ENST00000480227 TRAV8-3A0A0A6YYJ7 113 aa12.38□□□□□ -0.43
PKD1-213ENST00000480227 KRTAP1-1Q07627 177 aa12.38□□□□□ -0.43
PKD1-213ENST00000480227 PIK3CD-AS1Q5SR53 167 aa12.38□□□□□ -0.43
PKD1-213ENST00000480227 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
PKD1-213ENST00000480227 HECTD1Q9ULT8 2610 aa12.38□□□□□ -0.43
PKD1-213ENST00000480227 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 LINC00467Q9BRT7 94 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 A4D1N5 150 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 MRPS36P82909 103 aaKnown RBP12.37□□□□□ -0.43
PKD1-213ENST00000480227 C1orf158Q8N1D5 194 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 UBE2D4Q9Y2X8 147 aa12.37□□□□□ -0.43
PKD1-213ENST00000480227 UBE2D3P61077 147 aa12.36□□□□□ -0.43
PKD1-213ENST00000480227 UBE2D2P62837 147 aa12.36□□□□□ -0.43
PKD1-213ENST00000480227 BEAN1Q3B7T3 259 aa12.36□□□□□ -0.43
PKD1-213ENST00000480227 PTH2Q96A98 100 aa12.36□□□□□ -0.43
PKD1-213ENST00000480227 YAE1D1Q9NRH1 226 aa12.36□□□□□ -0.43
PKD1-213ENST00000480227 COTL1Q14019 142 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 PRO1854Q9UHT4 67 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 RS1O15537 224 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 Q6ZUT4 128 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 MUSTN1Q8IVN3 82 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 LINC01006Q8NI28 216 aa12.35□□□□□ -0.43
PKD1-213ENST00000480227 ZNF418Q8TF45 676 aaPredicted RBP12.35□□□□□ -0.43
PKD1-213ENST00000480227 TRGV1A0A0A0MS02 117 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 A8MZ25 164 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 J3QKU1 62 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 INSL3P51460 131 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 TRAV25A0A0B4J276 109 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
PKD1-213ENST00000480227 H7C2G1 150 aa12.33□□□□□ -0.44
PKD1-213ENST00000480227 WFDC10AQ9H1F0 79 aa12.33□□□□□ -0.44
PKD1-213ENST00000480227 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
PKD1-213ENST00000480227 EIF4EBP3O60516 100 aaPredicted RBP12.33□□□□□ -0.44
PKD1-213ENST00000480227 SPINK8P0C7L1 97 aa12.33□□□□□ -0.44
PKD1-213ENST00000480227 SMCPP49901 116 aaPredicted RBP12.33□□□□□ -0.44
PKD1-213ENST00000480227 CRYBA4P53673 196 aa12.33□□□□□ -0.44
PKD1-213ENST00000480227 TCL1BO95988 128 aa12.32□□□□□ -0.44
PKD1-213ENST00000480227 SCGB1C2P0DMR2 95 aa12.32□□□□□ -0.44
PKD1-213ENST00000480227 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms