RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 IQCJQ1A5X6 159 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 DGAT2L7PQ6IED9 249 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 SLC51BQ86UW2 128 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 CLRN3Q8NCR9 226 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 C11orf52Q96A22 123 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 SSBP4Q9BWG4 385 aaPredicted RBP4.62□□□□□ -1.67
COL17A1-205ENST00000480127 RPP21Q9H633 154 aaKnown RBP4.62□□□□□ -1.67
COL17A1-205ENST00000480127 NIT2Q9NQR4 276 aa4.62□□□□□ -1.67
COL17A1-205ENST00000480127 hCG_2014768A0A024R1R8 64 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 TRAV1-1A0A0B4J248 108 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 M0QY20 66 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 GATCO43716 136 aaKnown RBP4.61□□□□□ -1.67
COL17A1-205ENST00000480127 PRSS1P07477 247 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 TEX261Q6UWH6 196 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 AKAP14Q86UN6 197 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 C7orf33Q8WU49 177 aa4.61□□□□□ -1.67
COL17A1-205ENST00000480127 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
COL17A1-205ENST00000480127 RNASE7Q9H1E1 156 aaKnown RBP4.61□□□□□ -1.67
COL17A1-205ENST00000480127 FAT3Q8TDW7 4589 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 TRAV26-2A0A0B4J265 109 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 PMCHP20382 165 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 BLOC1S1P78537 153 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 NTM-AS1Q6ZSK4 140 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 NUDT10Q8NFP7 164 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 NUDT11Q96G61 164 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 PGLYRP4Q96LB8 373 aa4.6□□□□□ -1.67
COL17A1-205ENST00000480127 GAGE12HA6NDE8 117 aa4.59□□□□□ -1.67
COL17A1-205ENST00000480127 A8MWL6 223 aa4.59□□□□□ -1.67
COL17A1-205ENST00000480127 IGLC6P0CF74 106 aa4.59□□□□□ -1.67
COL17A1-205ENST00000480127 FCER1GP30273 86 aa4.59□□□□□ -1.67
COL17A1-205ENST00000480127 HIGD2BQ4VC39 106 aa4.59□□□□□ -1.67
COL17A1-205ENST00000480127 PRR34Q9NV39 138 aa4.59□□□□□ -1.67
COL17A1-205ENST00000480127 IGLV4-60A0A075B6I1 120 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-205ENST00000480127 IGKV2-24A0A0C4DH68 120 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 A0A1B0GUV1 79 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 IGKV2-29A2NJV5 120 aaPredicted RBP4.58□□□□□ -1.68
COL17A1-205ENST00000480127 C19orf71A6NCJ1 209 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 CTRLP40313 264 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 HNRNPA3P51991 378 aaKnown RBP4.58□□□□□ -1.68
COL17A1-205ENST00000480127 SMAGPQ0VAQ4 97 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 ALKAL2Q6UX46 152 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 TCTE3Q8IZS6 198 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 C9orf62Q8N4C0 152 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 C9orf163Q8N9P6 203 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 OR5A1Q8NGJ0 315 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 GTSF1Q8WW33 167 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 MRAP2Q96G30 205 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 SMIM7Q9BQ49 75 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 PKIGQ9Y2B9 76 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 KIF25-AS1Q9Y6Z4 181 aa4.58□□□□□ -1.68
COL17A1-205ENST00000480127 SDHAF1A6NFY7 115 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 NCR2O95944 276 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 MALP21145 153 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 RPS10P46783 165 aaKnown RBP4.57□□□□□ -1.68
COL17A1-205ENST00000480127 XCL1P47992 114 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 SS18Q15532 418 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 MAJINQ3KP22 176 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 C20orf203Q8NBC4 194 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 OCC1Q8TAD7 63 aa4.57□□□□□ -1.68
COL17A1-205ENST00000480127 CHCHD10Q8WYQ3 142 aaPredicted RBP4.57□□□□□ -1.68
COL17A1-205ENST00000480127 RPL39LQ96EH5 51 aaKnown RBP4.57□□□□□ -1.68
COL17A1-205ENST00000480127 RNF213Q63HN8 5207 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 TRBV20OR9-2A0A075B6H5 130 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 A0A1B0GUT8 65 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 ZNF727A8MUV8 499 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 TMEM250H0YL14 139 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 I3L3M4 83 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 ZNF561-AS1K7EIQ3 104 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 FGF6P10767 208 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 CNBPP62633 177 aaKnown RBP4.56□□□□□ -1.68
COL17A1-205ENST00000480127 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
COL17A1-205ENST00000480127 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.56□□□□□ -1.68
COL17A1-205ENST00000480127 H7C423 109 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 K7EN84 100 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 ZNF25P17030 456 aaPredicted RBP4.55□□□□□ -1.68
COL17A1-205ENST00000480127 COX6A2Q02221 97 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 RIGQ13278 110 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 Q6ZNX1 250 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 RNF185Q96GF1 192 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 GFRA4Q9GZZ7 299 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 TMEM242Q9NWH2 141 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 LINC00474Q9P2X8 69 aa4.55□□□□□ -1.68
COL17A1-205ENST00000480127 A0A087WYN8 130 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 C7orf77A4D0Y5 90 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 HIGD1CA8MV81 97 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 CCL25O15444 150 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 NDUFS6O75380 124 aaKnown RBP4.54□□□□□ -1.68
COL17A1-205ENST00000480127 PPP1R17O96001 155 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 FOXA3P55318 350 aaPredicted RBP4.54□□□□□ -1.68
COL17A1-205ENST00000480127 SDIM1Q6ZPB5 146 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 STPG4Q8N801 248 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 ISOC2Q96AB3 205 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 TMEM18Q96B42 140 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 KIR2DL4Q99706 377 aa4.54□□□□□ -1.68
COL17A1-205ENST00000480127 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms