RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 H3BMQ9 156 aa6.62□□□□□ -1.35
USP11-208ENST00000480104 M0QY20 66 aa6.62□□□□□ -1.35
USP11-208ENST00000480104 PVALBP20472 110 aaPredicted RBP6.62□□□□□ -1.35
USP11-208ENST00000480104 LINC01559Q495D7 138 aa6.62□□□□□ -1.35
USP11-208ENST00000480104 AMMECR1LQ6DCA0 310 aa6.62□□□□□ -1.35
USP11-208ENST00000480104 RNASEKQ6P5S7 137 aaKnown RBP6.62□□□□□ -1.35
USP11-208ENST00000480104 PQLC2Q6ZP29 291 aa6.62□□□□□ -1.35
USP11-208ENST00000480104 WDR61Q9GZS3 305 aaKnown RBP6.62□□□□□ -1.35
USP11-208ENST00000480104 LINC00959A0A1B0GUT2 108 aa6.61□□□□□ -1.35
USP11-208ENST00000480104 C17orf112F2Z3M2 114 aa6.61□□□□□ -1.35
USP11-208ENST00000480104 LINC00242Q5T6M2 205 aa6.61□□□□□ -1.35
USP11-208ENST00000480104 Q86TA4 180 aa6.61□□□□□ -1.35
USP11-208ENST00000480104 TOMM5Q8N4H5 51 aa6.61□□□□□ -1.35
USP11-208ENST00000480104 EPDR1Q9UM22 224 aa6.61□□□□□ -1.35
USP11-208ENST00000480104 FAM25EA8MYX2 175 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 HMGB3O15347 200 aaKnown RBP6.6□□□□□ -1.35
USP11-208ENST00000480104 AP3S2P59780 193 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 NHLH2Q02577 135 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 COTL1Q14019 142 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 XP32Q5T750 250 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 CTDSP1Q9GZU7 261 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
USP11-208ENST00000480104 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
USP11-208ENST00000480104 ESDP10768 282 aa6.59□□□□□ -1.35
USP11-208ENST00000480104 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
USP11-208ENST00000480104 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.35
USP11-208ENST00000480104 CD164L2Q6UWJ8 174 aa6.59□□□□□ -1.35
USP11-208ENST00000480104 VCX3AQ9NNX9 186 aa6.59□□□□□ -1.35
USP11-208ENST00000480104 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.58□□□□□ -1.36
USP11-208ENST00000480104 IGKV2-29A2NJV5 120 aaPredicted RBP6.58□□□□□ -1.36
USP11-208ENST00000480104 MGPP08493 103 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 ARL14EPLP0DKL9 152 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 SMIM17P0DL12 118 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 MALP21145 153 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
USP11-208ENST00000480104 SSTP61278 116 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 SUMO1P63165 101 aaKnown RBP6.58□□□□□ -1.36
USP11-208ENST00000480104 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 Q9H521 79 aa6.58□□□□□ -1.36
USP11-208ENST00000480104 IGKV2D-26A0A0A0MRZ7 120 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 A6NHS1 94 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 NUPR1O60356 82 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 GAGE2EQ4V326 116 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 OR2D3Q8NGH3 330 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 AP1S3Q96PC3 154 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 GAGE2DQ9UEU5 116 aa6.57□□□□□ -1.36
USP11-208ENST00000480104 IGLV8-61A0A075B6I0 122 aa6.56□□□□□ -1.36
USP11-208ENST00000480104 CFC1P0CG37 223 aa6.56□□□□□ -1.36
USP11-208ENST00000480104 RAB32Q13637 225 aa6.56□□□□□ -1.36
USP11-208ENST00000480104 IMMP2LQ96T52 175 aa6.56□□□□□ -1.36
USP11-208ENST00000480104 A0A1W2PPV4 95 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 COX7A2LO14548 114 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 NDUFB6O95139 128 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 TNFRSF6BO95407 300 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 SPAG11BQ08648 103 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 COX6B2Q6YFQ2 88 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 UBE2D4Q9Y2X8 147 aa6.55□□□□□ -1.36
USP11-208ENST00000480104 SNAI2O43623 268 aa6.54□□□□□ -1.36
USP11-208ENST00000480104 LRRC37A5PQ49AS3 106 aa6.54□□□□□ -1.36
USP11-208ENST00000480104 PCOTHQ58A44 107 aa6.54□□□□□ -1.36
USP11-208ENST00000480104 RASL11AQ6T310 242 aa6.54□□□□□ -1.36
USP11-208ENST00000480104 COX8CQ7Z4L0 72 aa6.54□□□□□ -1.36
USP11-208ENST00000480104 SMDT1Q9H4I9 107 aa6.54□□□□□ -1.36
USP11-208ENST00000480104 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
USP11-208ENST00000480104 Q6ZNX1 250 aa6.53□□□□□ -1.36
USP11-208ENST00000480104 RBM38Q9H0Z9 239 aaKnown RBP6.53□□□□□ -1.36
USP11-208ENST00000480104 BCE1O60756 84 aa6.52□□□□□ -1.37
USP11-208ENST00000480104 TLX1NBP0CAT3 122 aa6.52□□□□□ -1.37
USP11-208ENST00000480104 GCHFRP30047 84 aa6.52□□□□□ -1.37
USP11-208ENST00000480104 C10orf25Q5T742 122 aa6.52□□□□□ -1.37
USP11-208ENST00000480104 DAND5Q8N907 189 aa6.52□□□□□ -1.37
USP11-208ENST00000480104 BATF3Q9NR55 127 aa6.52□□□□□ -1.37
USP11-208ENST00000480104 A0A087WXM4 84 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 G3V3Q6 166 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 PEX7O00628 323 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 OR5AL1P0C617 328 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 ZNF25P17030 456 aaPredicted RBP6.51□□□□□ -1.37
USP11-208ENST00000480104 NTF3P20783 257 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 IL15RAQ13261 267 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 PYDC2Q56P42 97 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 DEDD2Q8WXF8 326 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
USP11-208ENST00000480104 H7C423 109 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 CXCL1P09341 107 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
USP11-208ENST00000480104 SPAG11AQ6PDA7 123 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 C3orf22Q8N5N4 141 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 TMEM101Q96IK0 257 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 BTF3L4Q96K17 158 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 ZFP30Q9Y2G7 519 aa6.5□□□□□ -1.37
USP11-208ENST00000480104 LCE2BO14633 110 aa6.49□□□□□ -1.37
USP11-208ENST00000480104 STAG3L2P0CL84 134 aa6.49□□□□□ -1.37
USP11-208ENST00000480104 STAG3L3P0CL85 134 aa6.49□□□□□ -1.37
USP11-208ENST00000480104 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
USP11-208ENST00000480104 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
USP11-208ENST00000480104 APCSP02743 223 aa6.48□□□□□ -1.37
USP11-208ENST00000480104 CTRLP40313 264 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms