RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 UBE2D3P61077 147 aa9.28□□□□□ -0.92
PTPRE-208ENST00000479896 MALRD1Q5VYJ5 2156 aa9.28□□□□□ -0.92
PTPRE-208ENST00000479896 ROS1P08922 2347 aa9.28□□□□□ -0.92
PTPRE-208ENST00000479896 HEATR5AQ86XA9 2040 aa9.28□□□□□ -0.92
PTPRE-208ENST00000479896 SS18L2Q9UHA2 77 aa9.28□□□□□ -0.92
PTPRE-208ENST00000479896 LINC01006Q8NI28 216 aa9.27□□□□□ -0.92
PTPRE-208ENST00000479896 BBC3Q96PG8 261 aaPredicted RBP9.27□□□□□ -0.92
PTPRE-208ENST00000479896 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.93
PTPRE-208ENST00000479896 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.93
PTPRE-208ENST00000479896 FOXI1Q12951 378 aa9.27□□□□□ -0.93
PTPRE-208ENST00000479896 TMEM131Q92545 1883 aa9.27□□□□□ -0.93
PTPRE-208ENST00000479896 LINC00474Q9P2X8 69 aa9.26□□□□□ -0.93
PTPRE-208ENST00000479896 LY6LH3BQJ8 138 aa9.26□□□□□ -0.93
PTPRE-208ENST00000479896 IGLC6P0CF74 106 aa9.26□□□□□ -0.93
PTPRE-208ENST00000479896 C9orf85Q96MD7 179 aa9.26□□□□□ -0.93
PTPRE-208ENST00000479896 LELP1Q5T871 98 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 XAGE1AQ9HD64 81 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 TRAV23DV6A0A075B6W5 121 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 DOCK10Q96BY6 2186 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 P0C879 139 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 WFDC2Q14508 124 aa9.25□□□□□ -0.93
PTPRE-208ENST00000479896 TNRC6BQ9UPQ9 1833 aaKnown RBP9.25□□□□□ -0.93
PTPRE-208ENST00000479896 TMEM223A0PJW6 202 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 PLA2G2EQ9NZK7 142 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 J3KT08 172 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 TAX1BP3O14907 124 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 C10orf99Q6UWK7 81 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 LINC00643Q86TS7 51 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 WNK2Q9Y3S1 2297 aa9.24□□□□□ -0.93
PTPRE-208ENST00000479896 ABCA1O95477 2261 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 CD164L2Q6UWJ8 174 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 Q8N976 141 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 DOCK11Q5JSL3 2073 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 M0R378 163 aa9.23□□□□□ -0.93
PTPRE-208ENST00000479896 CDPF1Q6NVV7 123 aa9.22□□□□□ -0.93
PTPRE-208ENST00000479896 GTF3C1Q12789 2109 aa9.22□□□□□ -0.93
PTPRE-208ENST00000479896 M0QY20 66 aa9.22□□□□□ -0.93
PTPRE-208ENST00000479896 PRR15LQ9BU68 103 aa9.22□□□□□ -0.93
PTPRE-208ENST00000479896 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
PTPRE-208ENST00000479896 PPDPFQ9H3Y8 114 aa9.22□□□□□ -0.93
PTPRE-208ENST00000479896 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-208ENST00000479896 TCL1BO95988 128 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 ATP5EP2Q5VTU8 51 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 A0A0J9YWU9 116 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 NDUFA7O95182 113 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 IGKV2D-28P01615 120 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 RBX1P62877 108 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 GDF5OSQ5U4N7 250 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 LINC00308Q8TCZ7 52 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 CLUHP3Q96NS8 147 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 C11orf1Q9H5F2 150 aa9.21□□□□□ -0.93
PTPRE-208ENST00000479896 C22orf34Q6ZV56 151 aa9.21□□□□□ -0.94
PTPRE-208ENST00000479896 PLAC8L1A1L4L8 177 aa9.21□□□□□ -0.94
PTPRE-208ENST00000479896 SVIPQ8NHG7 77 aa9.21□□□□□ -0.94
PTPRE-208ENST00000479896 TNRC6AQ8NDV7 1962 aaKnown RBP9.21□□□□□ -0.94
PTPRE-208ENST00000479896 HRCT1Q6UXD1 115 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 DCANP1Q8TF63 244 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 PRO3102Q9H379 93 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 KIF26AQ9ULI4 1882 aaPredicted RBP9.2□□□□□ -0.94
PTPRE-208ENST00000479896 NOTCH4Q99466 2003 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 UBE2D2P62837 147 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 TDRG1Q3Y452 100 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 SPATA12Q7Z6I5 190 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 TEX49A0A1B0GTD5 131 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 NANOS2P60321 138 aaKnown RBP9.2□□□□□ -0.94
PTPRE-208ENST00000479896 DOCK9Q9BZ29 2069 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
PTPRE-208ENST00000479896 SLPIP03973 132 aa9.19□□□□□ -0.94
PTPRE-208ENST00000479896 SCXQ7RTU7 201 aa9.19□□□□□ -0.94
PTPRE-208ENST00000479896 ZGRF1Q86YA3 2104 aa9.19□□□□□ -0.94
PTPRE-208ENST00000479896 IGLV2-8P01709 118 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 CCKP06307 115 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 PROK1P58294 105 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 C6orf99Q4VX62 202 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 PIK3CD-AS1Q5SR53 167 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 C1orf229Q6ZS94 237 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-208ENST00000479896 ADAMTS9Q9P2N4 1935 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 FRMD6-AS1P0C7T7 363 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 PYGO1Q9Y3Y4 419 aa9.18□□□□□ -0.94
PTPRE-208ENST00000479896 C18orf65Q6ZTR6 163 aa9.17□□□□□ -0.94
PTPRE-208ENST00000479896 WFDC10AQ9H1F0 79 aa9.17□□□□□ -0.94
PTPRE-208ENST00000479896 SPTAN1Q13813 2472 aaKnown RBP9.17□□□□□ -0.94
PTPRE-208ENST00000479896 IGLV9-49A0A0B4J1Y8 123 aa9.17□□□□□ -0.94
PTPRE-208ENST00000479896 BRWD1-AS2P59051 145 aa9.17□□□□□ -0.94
PTPRE-208ENST00000479896 IGHV4-30-4P0DP06 118 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 DENND4CQ5VZ89 1909 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 MLST8Q9BVC4 326 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 MED13Q9UHV7 2174 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
PTPRE-208ENST00000479896 Q8N6K4 173 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms