RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
SEC13-216ENST00000479868 H3BRM9 83 aa9.41□□□□□ -0.9
SEC13-216ENST00000479868 KRTAP10-3P60369 221 aa9.41□□□□□ -0.9
SEC13-216ENST00000479868 VPS25Q9BRG1 176 aa9.41□□□□□ -0.9
SEC13-216ENST00000479868 RS1O15537 224 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
SEC13-216ENST00000479868 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 CEND1Q8N111 149 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 IL17DQ8TAD2 202 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 RAB37Q96AX2 223 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 NAA38Q9BRA0 125 aaKnown RBP9.39□□□□□ -0.91
SEC13-216ENST00000479868 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 RHODO00212 210 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 IGHV3-53P01767 116 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 TM2D2Q9BX73 214 aa9.39□□□□□ -0.91
SEC13-216ENST00000479868 NSD1Q96L73 2696 aaPredicted RBP9.39□□□□□ -0.91
SEC13-216ENST00000479868 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
SEC13-216ENST00000479868 C9orf118A6NHY6 69 aa9.38□□□□□ -0.91
SEC13-216ENST00000479868 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
SEC13-216ENST00000479868 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
SEC13-216ENST00000479868 FN1P02751 2386 aaKnown RBP9.38□□□□□ -0.91
SEC13-216ENST00000479868 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
SEC13-216ENST00000479868 ZNF815PA8K554 130 aa9.37□□□□□ -0.91
SEC13-216ENST00000479868 H3BUT2 72 aa9.37□□□□□ -0.91
SEC13-216ENST00000479868 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
SEC13-216ENST00000479868 K7ERJ3 54 aa9.37□□□□□ -0.91
SEC13-216ENST00000479868 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
SEC13-216ENST00000479868 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
SEC13-216ENST00000479868 IGHV3-38A0A0C4DH36 116 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
SEC13-216ENST00000479868 TAL2Q16559 108 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 OR4C5Q8NGB2 326 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
SEC13-216ENST00000479868 HIST1H4GQ99525 98 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 FAM110AQ9BQ89 295 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 VWFP04275 2813 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 SMIM13P0DJ93 91 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 TSPEAR-AS2P59090 65 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 HERVK_113P61574 105 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 Q6ZTI0 123 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
SEC13-216ENST00000479868 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
SEC13-216ENST00000479868 NHP2Q9NX24 153 aaKnown RBP9.36□□□□□ -0.91
SEC13-216ENST00000479868 INAFM1C9JVW0 142 aa9.35□□□□□ -0.91
SEC13-216ENST00000479868 VCX2Q9H322 139 aa9.35□□□□□ -0.91
SEC13-216ENST00000479868 PYGO1Q9Y3Y4 419 aa9.35□□□□□ -0.91
SEC13-216ENST00000479868 NDUFA11Q86Y39 141 aa9.35□□□□□ -0.91
SEC13-216ENST00000479868 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
SEC13-216ENST00000479868 A0A0J9YXV3 536 aa9.34□□□□□ -0.91
SEC13-216ENST00000479868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.34□□□□□ -0.91
SEC13-216ENST00000479868 IGKV2-29A2NJV5 120 aaPredicted RBP9.34□□□□□ -0.91
SEC13-216ENST00000479868 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
SEC13-216ENST00000479868 SCGB1D4Q6XE38 83 aa9.34□□□□□ -0.91
SEC13-216ENST00000479868 AMELXQ99217 191 aa9.34□□□□□ -0.91
SEC13-216ENST00000479868 NOP10Q9NPE3 64 aaKnown RBP9.34□□□□□ -0.91
SEC13-216ENST00000479868 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
SEC13-216ENST00000479868 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
SEC13-216ENST00000479868 PF4P02776 101 aa9.33□□□□□ -0.92
SEC13-216ENST00000479868 ZNF22P17026 224 aaPredicted RBP9.33□□□□□ -0.92
SEC13-216ENST00000479868 CSNK1G2-AS1Q8NCQ2 148 aa9.33□□□□□ -0.92
SEC13-216ENST00000479868 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
SEC13-216ENST00000479868 UBE2D4Q9Y2X8 147 aa9.32□□□□□ -0.92
SEC13-216ENST00000479868 TENM1Q9UKZ4 2725 aa9.32□□□□□ -0.92
SEC13-216ENST00000479868 GAGE10A6NGK3 116 aa9.32□□□□□ -0.92
SEC13-216ENST00000479868 LINC00482Q8N8I6 264 aa9.32□□□□□ -0.92
SEC13-216ENST00000479868 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
SEC13-216ENST00000479868 J3QQQ9 107 aa9.31□□□□□ -0.92
SEC13-216ENST00000479868 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
SEC13-216ENST00000479868 TRAV4A0A0B4J268 109 aa9.31□□□□□ -0.92
SEC13-216ENST00000479868 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
SEC13-216ENST00000479868 SAMD5Q5TGI4 173 aa9.31□□□□□ -0.92
SEC13-216ENST00000479868 A0A0J9YY99 117 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 C12orf74Q32Q52 190 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 K7EQD1 137 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 CRYBA4P53673 196 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 SPATA3Q8NHX4 192 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 SPANXA1Q9NS26 97 aa9.3□□□□□ -0.92
SEC13-216ENST00000479868 K7EP34 96 aa9.29□□□□□ -0.92
SEC13-216ENST00000479868 MRPS36P82909 103 aaKnown RBP9.29□□□□□ -0.92
SEC13-216ENST00000479868 Q6ZUT4 128 aa9.29□□□□□ -0.92
SEC13-216ENST00000479868 LEPROTO15243 131 aa9.29□□□□□ -0.92
SEC13-216ENST00000479868 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
SEC13-216ENST00000479868 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
SEC13-216ENST00000479868 OXLD1Q5BKU9 147 aa9.29□□□□□ -0.92
SEC13-216ENST00000479868 GTF2H5Q6ZYL4 71 aa9.29□□□□□ -0.92
SEC13-216ENST00000479868 GAGE12BA1L429 117 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 GAGE7O76087 117 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 GAGE12FP0CL80 117 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 GAGE12GP0CL81 117 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 GAGE12IP0CL82 117 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 RRN3P1Q2M238 152 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 SPCS1Q9Y6A9 102 aa9.28□□□□□ -0.92
SEC13-216ENST00000479868 FABP2P12104 132 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 537.9 ms