RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, human

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIK3-204	ENST00000479620		A0A1B0GUV1	79 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	LRCOL1	A6NCL2	159 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620		F8W036	122 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	PPP1R17	O96001	155 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	POLR2K	P53803	58 aa	Known RBP	11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	KRTAP10-2	P60368	255 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	RBX1	P62877	108 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	HBB	P68871	147 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	COMMD7	Q86VX2	200 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620		Q8N976	141 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	UBE2W	Q96B02	151 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	RMI2	Q96E14	147 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	TMEM70	Q9BUB7	260 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	SEC11C	Q9BY50	192 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	ST20	Q9HBF5	79 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620	PGPEP1	Q9NXJ5	209 aa		11.31	□□□□□ -0.6
GRIK3-204	ENST00000479620		I3L3M4	83 aa		11.3	□□□□□ -0.6
GRIK3-204	ENST00000479620	RPS10	P46783	165 aa	Known RBP	11.3	□□□□□ -0.6
GRIK3-204	ENST00000479620	AMT	P48728	403 aa		11.3	□□□□□ -0.6
GRIK3-204	ENST00000479620	MRPL54	Q6P161	138 aa	Known RBP	11.3	□□□□□ -0.6
GRIK3-204	ENST00000479620	ENHO	Q6UWT2	76 aa		11.3	□□□□□ -0.6
GRIK3-204	ENST00000479620	PRR34	Q9NV39	138 aa		11.3	□□□□□ -0.6
GRIK3-204	ENST00000479620	TRBV27	A0A0K0K1C4	114 aa		11.29	□□□□□ -0.6
GRIK3-204	ENST00000479620	C16orf90	A8MZG2	172 aa		11.29	□□□□□ -0.6
GRIK3-204	ENST00000479620	ANG	P03950	147 aa	Known RBP	11.29	□□□□□ -0.6
GRIK3-204	ENST00000479620	MRPL51	Q4U2R6	128 aa	Known RBP	11.29	□□□□□ -0.6
GRIK3-204	ENST00000479620	NRAC	Q8N912	160 aa		11.29	□□□□□ -0.6
GRIK3-204	ENST00000479620	RYR1	P21817	5038 aa		11.28	□□□□□ -0.6
GRIK3-204	ENST00000479620	PMCH	P20382	165 aa		11.28	□□□□□ -0.6
GRIK3-204	ENST00000479620	DEFB104A	Q8WTQ1	72 aa		11.28	□□□□□ -0.6
GRIK3-204	ENST00000479620	APOB	P04114	4563 aa	Known RBP	11.28	□□□□□ -0.6
GRIK3-204	ENST00000479620	SMKR1	H3BMG3	65 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620		H7C423	109 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	APCS	P02743	223 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	MIA	Q16674	131 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	C10orf91	Q5T1B1	145 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	CDPF1	Q6NVV7	123 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	MAPKAPK5-AS1	Q8N8E1	139 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	IMMP2L	Q96T52	175 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	CTDSP1	Q9GZU7	261 aa		11.27	□□□□□ -0.61
GRIK3-204	ENST00000479620	TRBV24-1	A0A075B6N3	115 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	IGKV2D-24	A0A075B6R9	120 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	VCY	O14598	125 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	UBE2L6	O14933	153 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	CRP	P02741	224 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	LINC00269	Q8N2A0	174 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	C20orf203	Q8NBC4	194 aa		11.26	□□□□□ -0.61
GRIK3-204	ENST00000479620	TSHB	P01222	138 aa		11.25	□□□□□ -0.61
GRIK3-204	ENST00000479620	ESD	P10768	282 aa		11.25	□□□□□ -0.61
GRIK3-204	ENST00000479620	CKS2	P33552	79 aa		11.25	□□□□□ -0.61
GRIK3-204	ENST00000479620	SUMO2	P61956	95 aa	Known RBP	11.25	□□□□□ -0.61
GRIK3-204	ENST00000479620	C20orf78	Q9BR46	151 aa		11.25	□□□□□ -0.61
GRIK3-204	ENST00000479620	IGLV4-60	A0A075B6I1	120 aa		11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620	PPBP	P02775	128 aa		11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620	RPL32	P62910	135 aa	Known RBP	11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620		Q8N814	137 aa		11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620	BTF3L4	Q96K17	158 aa		11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620	C1orf43	Q9BWL3	253 aa		11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.24	□□□□□ -0.61
GRIK3-204	ENST00000479620	REG3A	Q06141	175 aa		11.23	□□□□□ -0.61
GRIK3-204	ENST00000479620	NTN5	Q8WTR8	489 aa	Predicted RBP	11.23	□□□□□ -0.61
GRIK3-204	ENST00000479620	TMEM242	Q9NWH2	141 aa		11.23	□□□□□ -0.61
GRIK3-204	ENST00000479620		D6R8Y8	96 aa		11.22	□□□□□ -0.61
GRIK3-204	ENST00000479620	PHOX2A	O14813	284 aa		11.22	□□□□□ -0.61
GRIK3-204	ENST00000479620	TNFRSF6B	O95407	300 aa		11.22	□□□□□ -0.61
GRIK3-204	ENST00000479620	WFDC2	Q14508	124 aa		11.22	□□□□□ -0.61
GRIK3-204	ENST00000479620	BAALC	Q8WXS3	180 aa		11.22	□□□□□ -0.61
GRIK3-204	ENST00000479620	HSPG2	P98160	4391 aa		11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	TRAV9-1	A0A075B6T8	112 aa		11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	TRAV8-4	A0A0B4J246	113 aa		11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	FGF6	P10767	208 aa		11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	ZNF25	P17030	456 aa	Predicted RBP	11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	KRTAP26-1	Q6PEX3	210 aa		11.21	□□□□□ -0.61
GRIK3-204	ENST00000479620	AMMECR1L	Q6DCA0	310 aa		11.2	□□□□□ -0.62
GRIK3-204	ENST00000479620	KIR2DL4	Q99706	377 aa		11.2	□□□□□ -0.62
GRIK3-204	ENST00000479620	DNAH8	Q96JB1	4490 aa		11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	TCAP	O15273	167 aa		11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	CDK2AP2	O75956	126 aa		11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	FUS	P35637	526 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	CLPSL2	Q6UWE3	100 aa		11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	TMEM136	Q6ZRR5	245 aa		11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	MRPL52	Q86TS9	123 aa	Known RBP	11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	ORMDL3	Q8N138	153 aa		11.19	□□□□□ -0.62
GRIK3-204	ENST00000479620	C7orf77	A4D0Y5	90 aa		11.18	□□□□□ -0.62
GRIK3-204	ENST00000479620	LECT2	O14960	151 aa		11.18	□□□□□ -0.62
GRIK3-204	ENST00000479620	NPY	P01303	97 aa		11.18	□□□□□ -0.62
GRIK3-204	ENST00000479620	FCER1G	P30273	86 aa		11.18	□□□□□ -0.62
GRIK3-204	ENST00000479620	RNASEK	Q6P5S7	137 aa	Known RBP	11.18	□□□□□ -0.62
GRIK3-204	ENST00000479620	IGLV5-52	A0A0A0MRZ9	124 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	PRSS47	A8MTI9	375 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	RHEB	Q15382	184 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	CLRN3	Q8NCR9	226 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	PRELID3A	Q96N28	172 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	SMIM2	Q9BVW6	85 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	LAMTOR2	Q9Y2Q5	125 aa		11.17	□□□□□ -0.62
GRIK3-204	ENST00000479620	GCSH	P23434	173 aa		11.16	□□□□□ -0.62
GRIK3-204	ENST00000479620	TMEM101	Q96IK0	257 aa		11.16	□□□□□ -0.62
GRIK3-204	ENST00000479620	S100P	P25815	95 aa		11.15	□□□□□ -0.62

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