RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 IGHV3-73A0A0B4J1V6 119 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 LOC100131303A0A0U1RQF7 123 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 SDHAF1A6NFY7 115 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 CDK2AP2O75956 126 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 MGPP08493 103 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 CAMPP49913 170 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 SUMO2P61956 95 aaKnown RBP6.07□□□□□ -1.44
DDX56-211ENST00000479602 TNP2Q05952 138 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 TNFRSF18Q9Y5U5 241 aa6.07□□□□□ -1.44
DDX56-211ENST00000479602 TRAV8-6A0A0B4J262 113 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 NBDYA0A0U1RRE5 68 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 A0A1B0GUV1 79 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 LINC01546A6NGU7 62 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 LINC01549A6NIU2 74 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 CKS2P33552 79 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 OR10J3Q5JRS4 329 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 ST20Q9HBF5 79 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 Q9UF83 564 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 URGCP-MRPS24S4R325 110 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 VPS13BQ7Z7G8 4022 aa6.06□□□□□ -1.44
DDX56-211ENST00000479602 GAGE12JA6NER3 117 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 D6R8Y8 96 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 I3L3M4 83 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 VCYO14598 125 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 SIVA1O15304 175 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 NPSP0C0P6 89 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 ESDP10768 282 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 RPS10P46783 165 aaKnown RBP6.05□□□□□ -1.44
DDX56-211ENST00000479602 GAGE1Q13065 139 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 GAGE4Q13068 117 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 GAGE5Q13069 117 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 GAGE13Q4V321 117 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 ATRAIDQ6UW56 229 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 SMIM2Q9BVW6 85 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
DDX56-211ENST00000479602 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
DDX56-211ENST00000479602 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 IGHV1-24A0A0C4DH33 117 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 IGHV3-38A0A0C4DH36 116 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 SCO1O75880 301 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 TNFRSF6BO95407 300 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 ZNF25P17030 456 aaPredicted RBP6.04□□□□□ -1.44
DDX56-211ENST00000479602 SMAGPQ0VAQ4 97 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 COTL1Q14019 142 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 NTM-AS1Q6ZSK4 140 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 MRPL52Q86TS9 123 aaKnown RBP6.04□□□□□ -1.44
DDX56-211ENST00000479602 NIT1Q86X76 327 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 CBLN2Q8IUK8 224 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 UBE2DNLQ8IWF7 75 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 RPL39LQ96EH5 51 aaKnown RBP6.04□□□□□ -1.44
DDX56-211ENST00000479602 TIMM21Q9BVV7 248 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 Q9H8V8 135 aa6.04□□□□□ -1.44
DDX56-211ENST00000479602 NXT2Q9NPJ8 142 aaKnown RBP6.04□□□□□ -1.44
DDX56-211ENST00000479602 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
DDX56-211ENST00000479602 TRAV9-2A0A087WT02 112 aa6.03□□□□□ -1.44
DDX56-211ENST00000479602 C6orf223Q8N319 242 aa6.03□□□□□ -1.44
DDX56-211ENST00000479602 PRELID3AQ96N28 172 aa6.03□□□□□ -1.44
DDX56-211ENST00000479602 KIR2DL4Q99706 377 aa6.03□□□□□ -1.44
DDX56-211ENST00000479602 KRTAP1-5Q9BYS1 174 aa6.03□□□□□ -1.44
DDX56-211ENST00000479602 DMBT1Q9UGM3 2413 aaPredicted RBP6.02□□□□□ -1.45
DDX56-211ENST00000479602 TGIF2-C20orf24A0A0A6YYL0 155 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 TSHBP01222 138 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 NPYP01303 97 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 APCSP02743 223 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 PMCHP20382 165 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 G0S2P27469 103 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 ALKBH7Q9BT30 221 aaPredicted RBP6.02□□□□□ -1.45
DDX56-211ENST00000479602 TMEM243Q9BU79 118 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 PRR34Q9NV39 138 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 TRAPPC1Q9Y5R8 145 aa6.02□□□□□ -1.45
DDX56-211ENST00000479602 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
DDX56-211ENST00000479602 COLCA2A8K830 154 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 IBA57-AS1B1ANH7 110 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 RAB5AP20339 215 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 SSTP61278 116 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 WFDC10BQ8IUB3 73 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 Q8N1X5 172 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 Q8N8P6 123 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 MRPL18Q9H0U6 180 aaKnown RBP6.01□□□□□ -1.45
DDX56-211ENST00000479602 MAP1LC3AQ9H492 121 aa6.01□□□□□ -1.45
DDX56-211ENST00000479602 C16orf90A8MZG2 172 aa6□□□□□ -1.45
DDX56-211ENST00000479602 C1orf196B1AJZ1 125 aa6□□□□□ -1.45
DDX56-211ENST00000479602 CCL25O15444 150 aa6□□□□□ -1.45
DDX56-211ENST00000479602 ORMDL2Q53FV1 153 aa6□□□□□ -1.45
DDX56-211ENST00000479602 NFE4Q86UQ8 179 aa6□□□□□ -1.45
DDX56-211ENST00000479602 C20orf203Q8NBC4 194 aa6□□□□□ -1.45
DDX56-211ENST00000479602 TMEM18Q96B42 140 aa6□□□□□ -1.45
DDX56-211ENST00000479602 PYGO1Q9Y3Y4 419 aa6□□□□□ -1.45
DDX56-211ENST00000479602 COX11Q9Y6N1 276 aa6□□□□□ -1.45
DDX56-211ENST00000479602 TRAV8-3A0A0A6YYJ7 113 aa5.99□□□□□ -1.45
DDX56-211ENST00000479602 SMKR1H3BMG3 65 aa5.99□□□□□ -1.45
DDX56-211ENST00000479602 AMTP48728 403 aa5.99□□□□□ -1.45
DDX56-211ENST00000479602 KRTAP10-2P60368 255 aa5.99□□□□□ -1.45
DDX56-211ENST00000479602 MRPS36P82909 103 aaKnown RBP5.99□□□□□ -1.45
DDX56-211ENST00000479602 Q0VG73 95 aa5.99□□□□□ -1.45
DDX56-211ENST00000479602 Q6ZRN7 208 aaPredicted RBP5.99□□□□□ -1.45
DDX56-211ENST00000479602 SPANXA1Q9NS26 97 aa5.99□□□□□ -1.45
DDX56-211ENST00000479602 A0A087WX48 190 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms