RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ALKAL2Q6UX46 152 aa11.21□□□□□ -0.61
ECHDC1-216ENST00000479525 RPL39LQ96EH5 51 aaKnown RBP11.21□□□□□ -0.61
ECHDC1-216ENST00000479525 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
ECHDC1-216ENST00000479525 F2Z2F3 143 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 CTRLP40313 264 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 PKIAP61925 76 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 Q6ZNX1 250 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 GATD1Q8NB37 220 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
ECHDC1-216ENST00000479525 C9orf62Q8N4C0 152 aa11.19□□□□□ -0.62
ECHDC1-216ENST00000479525 GTSF1Q8WW33 167 aa11.19□□□□□ -0.62
ECHDC1-216ENST00000479525 AMTP48728 403 aa11.18□□□□□ -0.62
ECHDC1-216ENST00000479525 HNRNPA3P51991 378 aaKnown RBP11.18□□□□□ -0.62
ECHDC1-216ENST00000479525 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
ECHDC1-216ENST00000479525 UBE2L6O14933 153 aa11.17□□□□□ -0.62
ECHDC1-216ENST00000479525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 IGKV2-29A2NJV5 120 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 COTL1Q14019 142 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 C9orf163Q8N9P6 203 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 SLPIP03973 132 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 RPL37AP61513 92 aaKnown RBP11.16□□□□□ -0.62
ECHDC1-216ENST00000479525 GATCO43716 136 aaKnown RBP11.15□□□□□ -0.63
ECHDC1-216ENST00000479525 AKAP14Q86UN6 197 aa11.15□□□□□ -0.63
ECHDC1-216ENST00000479525 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
ECHDC1-216ENST00000479525 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
ECHDC1-216ENST00000479525 A0A1B0GUV1 79 aa11.13□□□□□ -0.63
ECHDC1-216ENST00000479525 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
ECHDC1-216ENST00000479525 SDIM1Q6ZPB5 146 aa11.13□□□□□ -0.63
ECHDC1-216ENST00000479525 CNFNQ9BYD5 112 aa11.13□□□□□ -0.63
ECHDC1-216ENST00000479525 WDR73Q6P4I2 378 aa11.12□□□□□ -0.63
ECHDC1-216ENST00000479525 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
ECHDC1-216ENST00000479525 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
ECHDC1-216ENST00000479525 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
ECHDC1-216ENST00000479525 TAGLN2P37802 199 aaKnown RBP11.1□□□□□ -0.63
ECHDC1-216ENST00000479525 AMMECR1LQ6DCA0 310 aa11.1□□□□□ -0.63
ECHDC1-216ENST00000479525 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
ECHDC1-216ENST00000479525 APCSP02743 223 aa11.09□□□□□ -0.63
ECHDC1-216ENST00000479525 BLOC1S1P78537 153 aa11.09□□□□□ -0.63
ECHDC1-216ENST00000479525 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
ECHDC1-216ENST00000479525 DPH3Q96FX2 82 aa11.09□□□□□ -0.63
ECHDC1-216ENST00000479525 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
ECHDC1-216ENST00000479525 CNBPP62633 177 aaKnown RBP11.08□□□□□ -0.64
ECHDC1-216ENST00000479525 SMIM15Q7Z3B0 74 aa11.08□□□□□ -0.64
ECHDC1-216ENST00000479525 EIF5A2Q9GZV4 153 aaKnown RBP11.08□□□□□ -0.64
ECHDC1-216ENST00000479525 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
ECHDC1-216ENST00000479525 FGF6P10767 208 aa11.07□□□□□ -0.64
ECHDC1-216ENST00000479525 CHCHD10Q8WYQ3 142 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-216ENST00000479525 TMEM242Q9NWH2 141 aa11.07□□□□□ -0.64
ECHDC1-216ENST00000479525 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 A8MWL6 223 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 PMCHP20382 165 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 RPS10P46783 165 aaKnown RBP11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 LYPD6BQ8NI32 183 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
ECHDC1-216ENST00000479525 A0A087WYN8 130 aa11.05□□□□□ -0.64
ECHDC1-216ENST00000479525 A0A1B0GVG6 124 aa11.05□□□□□ -0.64
ECHDC1-216ENST00000479525 NCR2O95944 276 aa11.05□□□□□ -0.64
ECHDC1-216ENST00000479525 IGKV2-24A0A0C4DH68 120 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 HIGD1CA8MV81 97 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 TSHBP01222 138 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 COX6A2Q02221 97 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 LINC01551Q86U37 167 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 AMN1Q8IY45 258 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 RNF185Q96GF1 192 aa11.04□□□□□ -0.64
ECHDC1-216ENST00000479525 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 ZNF727A8MUV8 499 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 SRP19P09132 144 aaKnown RBP11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 XCL1P47992 114 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 I3L3M4 83 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 FOXI1Q12951 378 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 SPACA4Q8TDM5 124 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 BORCS7Q96B45 105 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
ECHDC1-216ENST00000479525 OXTP01178 125 aa11.02□□□□□ -0.65
ECHDC1-216ENST00000479525 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
ECHDC1-216ENST00000479525 HMCN2Q8NDA2 5059 aa11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 A0A1B0GUT8 65 aa11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 CCL25O15444 150 aa11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 RAB4AP20338 218 aa11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 MAJINQ3KP22 176 aa11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
ECHDC1-216ENST00000479525 PHOX2AO14813 284 aa11□□□□□ -0.65
ECHDC1-216ENST00000479525 ESDP10768 282 aa11□□□□□ -0.65
ECHDC1-216ENST00000479525 CT83Q5H943 113 aa11□□□□□ -0.65
ECHDC1-216ENST00000479525 V9GYV3 84 aa11□□□□□ -0.65
ECHDC1-216ENST00000479525 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
ECHDC1-216ENST00000479525 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms