RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 PLCH1Q4KWH8 1693 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 TOPAZ1Q8N9V7 1692 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 PRDM15P57071 1507 aaPredicted RBP0.17□□□□□ -2.38
CCDC58-204ENST00000479414 ARHGEF12Q9NZN5 1544 aa0.17□□□□□ -2.38
CCDC58-204ENST00000479414 SPTBN1Q01082 2364 aaKnown RBP0.17□□□□□ -2.38
CCDC58-204ENST00000479414 WDR97A6NE52 1622 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 MYO3AQ8NEV4 1616 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 GOLGA3Q08378 1498 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 MLH3Q9UHC1 1453 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 VPS13DQ5THJ4 4388 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 LY75O60449 1722 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 KNDC1Q76NI1 1749 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 TIAM2Q8IVF5 1701 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 AHCTF1Q8WYP5 2266 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 TIAM1Q13009 1591 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 TMEM30CPA0ZSE6 113 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 HIGD1CA8MV81 97 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 F2Z2F3 143 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 IL7P13232 177 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 KRTAP19-6Q3LI70 58 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 C5P01031 1676 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 NHSQ6T4R5 1651 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 QRICH2Q9H0J4 1663 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 AKAP11Q9UKA4 1901 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 ASXL1Q8IXJ9 1541 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 LAMC1P11047 1609 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 KIF14Q15058 1648 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 C1orf167Q5SNV9 1468 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 PXDNQ92626 1479 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 RAPGEF2Q9Y4G8 1499 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 KIAA1551Q9HCM1 1747 aa0.16□□□□□ -2.38
CCDC58-204ENST00000479414 DNAH11Q96DT5 4516 aa0.15□□□□□ -2.38
CCDC58-204ENST00000479414 SAMD9Q5K651 1589 aa0.15□□□□□ -2.38
CCDC58-204ENST00000479414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.15□□□□□ -2.39
CCDC58-204ENST00000479414 TMEM189A5PLL7 270 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 PGRMC1O00264 195 aaKnown RBP0.15□□□□□ -2.39
CCDC58-204ENST00000479414 IFNA21P01568 189 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 SRP9P49458 86 aaKnown RBP0.15□□□□□ -2.39
CCDC58-204ENST00000479414 IQCJQ1A5X6 159 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 CCSMST1Q4G0I0 132 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 VMO1Q7Z5L0 202 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 OR8J3Q8NGG0 315 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 NAT14Q8WUY8 206 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 CCDC115Q96NT0 180 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 SMIM7Q9BQ49 75 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 ASXL3Q9C0F0 2248 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 ACACAQ13085 2346 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 PRDM2Q13029 1718 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 QSER1Q2KHR3 1735 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 RICTORQ6R327 1708 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 UBR1Q8IWV7 1749 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 DOT1LQ8TEK3 1739 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 LRRC9Q6ZRR7 1453 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 MAGI1Q96QZ7 1491 aaPredicted RBP0.15□□□□□ -2.39
CCDC58-204ENST00000479414 ARHGEF5Q12774 1597 aa0.15□□□□□ -2.39
CCDC58-204ENST00000479414 IQGAP1P46940 1657 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 PPIP5K1Q6PFW1 1433 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 URB2Q14146 1524 aaKnown RBP0.14□□□□□ -2.39
CCDC58-204ENST00000479414 NEXMIFQ5QGS0 1516 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 UGGT2Q9NYU1 1516 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 FLGP20930 4061 aaPredicted RBP0.14□□□□□ -2.39
CCDC58-204ENST00000479414 LRRC37AA6NMS7 1700 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 HBDP02042 147 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 ETV6P41212 452 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 COX6A2Q02221 97 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 PRR15LQ9BU68 103 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 ATG5Q9H1Y0 275 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 C19orf12Q9NSK7 152 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 MAGI2Q86UL8 1455 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 SAMD9LQ8IVG5 1584 aa0.14□□□□□ -2.39
CCDC58-204ENST00000479414 COL14A1Q05707 1796 aaKnown RBP0.14□□□□□ -2.39
CCDC58-204ENST00000479414 SMG6Q86US8 1419 aaKnown RBP0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ABCC2Q92887 1545 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 SCRIBQ14160 1630 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 TOGARAM1Q9Y4F4 1720 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 SBF2Q86WG5 1849 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ARFGEF1Q9Y6D6 1849 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 KNL1Q8NG31 2342 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 DNAH8Q96JB1 4490 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 IFITM5A6NNB3 132 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 FAM107AO95990 144 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 RPL22P35268 128 aaKnown RBP0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ASIPP42127 132 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 UNQ5815/PRO19632Q6UWF5 114 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 OTOSQ8NHW6 89 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 DSCR8Q96T75 97 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 U3KQA8 63 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 FANCAO15360 1455 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ERVK-7P63135 1459 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 PLEKHH2Q8IVE3 1493 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 RGPD8O14715 1765 aaPredicted RBP0.13□□□□□ -2.39
CCDC58-204ENST00000479414 RGPD5Q99666 1765 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ARAP2Q8WZ64 1704 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 DEPDC5O75140 1603 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 CLTCL1P53675 1640 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ABCA5Q8WWZ7 1642 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 MAGI3Q5TCQ9 1506 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 ZFYVE16Q7Z3T8 1539 aa0.13□□□□□ -2.39
CCDC58-204ENST00000479414 LMTK2Q8IWU2 1503 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms