RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 Q8N8P6 123 aa12.73□□□□□ -0.37
RUNX3-204ENST00000479341 TRBV25-1A0A075B6N4 114 aa12.72□□□□□ -0.37
RUNX3-204ENST00000479341 IGHV1-24A0A0C4DH33 117 aa12.72□□□□□ -0.37
RUNX3-204ENST00000479341 LCE6AA0A183 80 aa12.72□□□□□ -0.37
RUNX3-204ENST00000479341 KIR2DL4Q99706 377 aa12.72□□□□□ -0.37
RUNX3-204ENST00000479341 BIRC6Q9NR09 4857 aa12.71□□□□□ -0.37
RUNX3-204ENST00000479341 LY6G6CO95867 125 aa12.71□□□□□ -0.37
RUNX3-204ENST00000479341 ESDP10768 282 aa12.71□□□□□ -0.37
RUNX3-204ENST00000479341 AMTP48728 403 aa12.71□□□□□ -0.37
RUNX3-204ENST00000479341 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
RUNX3-204ENST00000479341 C18orf32Q8TCD1 76 aa12.71□□□□□ -0.37
RUNX3-204ENST00000479341 NXT2Q9NPJ8 142 aaKnown RBP12.71□□□□□ -0.37
RUNX3-204ENST00000479341 EPPK1P58107 5090 aaKnown RBP12.71□□□□□ -0.38
RUNX3-204ENST00000479341 TCAPO15273 167 aa12.7□□□□□ -0.38
RUNX3-204ENST00000479341 FCER1GP30273 86 aa12.7□□□□□ -0.38
RUNX3-204ENST00000479341 IFI27P40305 119 aaPredicted RBP12.7□□□□□ -0.38
RUNX3-204ENST00000479341 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
RUNX3-204ENST00000479341 CHCHD7Q9BUK0 85 aa12.7□□□□□ -0.38
RUNX3-204ENST00000479341 Q9H8V8 135 aa12.69□□□□□ -0.38
RUNX3-204ENST00000479341 SIVA1O15304 175 aa12.68□□□□□ -0.38
RUNX3-204ENST00000479341 NIT1Q86X76 327 aa12.68□□□□□ -0.38
RUNX3-204ENST00000479341 PRSS3P2Q8NHM4 247 aa12.68□□□□□ -0.38
RUNX3-204ENST00000479341 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
RUNX3-204ENST00000479341 LINC01546A6NGU7 62 aa12.67□□□□□ -0.38
RUNX3-204ENST00000479341 K7EMI3 77 aa12.67□□□□□ -0.38
RUNX3-204ENST00000479341 DNAH10OSP0CZ25 163 aa12.67□□□□□ -0.38
RUNX3-204ENST00000479341 ALMS1Q8TCU4 4167 aa12.67□□□□□ -0.38
RUNX3-204ENST00000479341 VPS13DQ5THJ4 4388 aa12.66□□□□□ -0.38
RUNX3-204ENST00000479341 GAGE6Q13070 117 aa12.66□□□□□ -0.38
RUNX3-204ENST00000479341 LINC01556Q5JQF7 62 aa12.66□□□□□ -0.38
RUNX3-204ENST00000479341 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
RUNX3-204ENST00000479341 H7C423 109 aa12.65□□□□□ -0.38
RUNX3-204ENST00000479341 Q0VG73 95 aa12.65□□□□□ -0.38
RUNX3-204ENST00000479341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
RUNX3-204ENST00000479341 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
RUNX3-204ENST00000479341 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
RUNX3-204ENST00000479341 PKIAP61925 76 aa12.64□□□□□ -0.39
RUNX3-204ENST00000479341 LAGE3Q14657 143 aa12.64□□□□□ -0.39
RUNX3-204ENST00000479341 FA2HQ7L5A8 372 aa12.64□□□□□ -0.39
RUNX3-204ENST00000479341 Q8N3U1 123 aa12.64□□□□□ -0.39
RUNX3-204ENST00000479341 C20orf203Q8NBC4 194 aa12.64□□□□□ -0.39
RUNX3-204ENST00000479341 LINC00614P0C842 121 aa12.63□□□□□ -0.39
RUNX3-204ENST00000479341 ORMDL2Q53FV1 153 aa12.63□□□□□ -0.39
RUNX3-204ENST00000479341 UBE2L6O14933 153 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 IGHV3-30P01768 117 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 IGHV3-33P01772 117 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 IGHV3-30-3P0DP02 117 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 IGHV3-30-5P0DP03 117 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 RAB5BP61020 215 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 MPV17L2Q567V2 206 aa12.62□□□□□ -0.39
RUNX3-204ENST00000479341 A0A087WX48 190 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 A0A1B0GUV1 79 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BKO60814 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BJP06899 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 FGF6P10767 208 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BOP23527 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BBP33778 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BDP58876 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BCP62807 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 RBX1P62877 108 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST2H2BEQ16778 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BHQ93079 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BNQ99877 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HIST1H2BMQ99879 126 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 HYDINQ4G0P3 5121 aa12.61□□□□□ -0.39
RUNX3-204ENST00000479341 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 C1orf196B1AJZ1 125 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 K7EP13 123 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 MRPL52Q86TS9 123 aaKnown RBP12.6□□□□□ -0.39
RUNX3-204ENST00000479341 BAGE3Q86Y29 109 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 Q8N976 141 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 TMEM18Q96B42 140 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 AP5S1Q9NUS5 200 aa12.6□□□□□ -0.39
RUNX3-204ENST00000479341 RPL39P62891 51 aaKnown RBP12.59□□□□□ -0.39
RUNX3-204ENST00000479341 RNASEKQ6P5S7 137 aaKnown RBP12.59□□□□□ -0.39
RUNX3-204ENST00000479341 TIMM21Q9BVV7 248 aa12.59□□□□□ -0.39
RUNX3-204ENST00000479341 KRTAP1-5Q9BYS1 174 aa12.59□□□□□ -0.39
RUNX3-204ENST00000479341 IGLV4-60A0A075B6I1 120 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 TRAV9-2A0A087WT02 112 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
RUNX3-204ENST00000479341 G0S2P27469 103 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 Q6ZR54 194 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 CHCHD1Q96BP2 118 aaKnown RBP12.58□□□□□ -0.4
RUNX3-204ENST00000479341 UBE2D4Q9Y2X8 147 aa12.58□□□□□ -0.4
RUNX3-204ENST00000479341 LINC00310P59036 64 aa12.57□□□□□ -0.4
RUNX3-204ENST00000479341 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
RUNX3-204ENST00000479341 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
RUNX3-204ENST00000479341 CYSLTR1Q9Y271 337 aa12.57□□□□□ -0.4
RUNX3-204ENST00000479341 CSDC2Q9Y534 153 aaKnown RBP12.57□□□□□ -0.4
RUNX3-204ENST00000479341 IBA57-AS1B1ANH7 110 aa12.56□□□□□ -0.4
RUNX3-204ENST00000479341 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
RUNX3-204ENST00000479341 SMAGPQ0VAQ4 97 aa12.56□□□□□ -0.4
RUNX3-204ENST00000479341 SPANXA1Q9NS26 97 aa12.56□□□□□ -0.4
RUNX3-204ENST00000479341 KLK12Q9UKR0 248 aa12.56□□□□□ -0.4
RUNX3-204ENST00000479341 A0A096LNJ9 63 aa12.55□□□□□ -0.4
RUNX3-204ENST00000479341 M0R2N4 97 aa12.55□□□□□ -0.4
RUNX3-204ENST00000479341 SERF1AO75920 110 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms