RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 FAM231AP0DMU4 169 aa4.37□□□□□ -1.71
LRRC47-203ENST00000479239 FAM231CP0DMU5 169 aa4.37□□□□□ -1.71
LRRC47-203ENST00000479239 POLR2KP53803 58 aaKnown RBP4.37□□□□□ -1.71
LRRC47-203ENST00000479239 RNF183Q96D59 192 aa4.37□□□□□ -1.71
LRRC47-203ENST00000479239 ZNF479Q96JC4 524 aa4.37□□□□□ -1.71
LRRC47-203ENST00000479239 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
LRRC47-203ENST00000479239 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
LRRC47-203ENST00000479239 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 TRBV27A0A0K0K1C4 114 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 C20orf202A1L168 122 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 SYS1-DBNDD2H3BUS1 97 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 TRIAP1O43715 76 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 DEFB130BP0DP73 79 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 DEFB130AP0DP74 79 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 MIFP14174 115 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 G0S2P27469 103 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 S100A12P80511 92 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 PET117Q6UWS5 81 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 Q8N976 141 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 DEFB104AQ8WTQ1 72 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 IFI27L1Q96BM0 104 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 C18orf15Q96N68 181 aa4.36□□□□□ -1.71
LRRC47-203ENST00000479239 TRGV4A0A0C4DH28 118 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 H0Y8G0 127 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 DEFB4AO15263 64 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 ATP5LO75964 103 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 TSHBP01222 138 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 PRSS1P07477 247 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 RHOHQ15669 191 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 FAM222AQ5U5X8 452 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 SPATA12Q7Z6I5 190 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 LINC00612Q8N6U2 182 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 NEXN-AS1Q8NBZ9 246 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 SCGB3A1Q96QR1 104 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 Q9UF83 564 aa4.35□□□□□ -1.71
LRRC47-203ENST00000479239 TENM3Q9P273 2699 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 TRBV10-1A0A0K0K1A3 114 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.34□□□□□ -1.71
LRRC47-203ENST00000479239 K7EQD1 137 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 PRB2P02812 416 aaPredicted RBP4.34□□□□□ -1.71
LRRC47-203ENST00000479239 SPART-AS1P0CW21 52 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
LRRC47-203ENST00000479239 FHL2Q14192 279 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 TEX43Q6ZNM6 134 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 SLC25A29Q8N8R3 303 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 Q8NAQ8 132 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 ZNRF2Q8NHG8 242 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
LRRC47-203ENST00000479239 TOMM6Q96B49 74 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 PRADC1Q9BSG0 188 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 DKK2Q9UBU2 259 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 CYSLTR1Q9Y271 337 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
LRRC47-203ENST00000479239 RYR2Q92736 4967 aa4.34□□□□□ -1.72
LRRC47-203ENST00000479239 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 IGHV3-38A0A0C4DH36 116 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 LINC01549A6NIU2 74 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 PCP4L1A6NKN8 68 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 TIRAPP58753 221 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 DAD1P61803 113 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 GAGE1Q13065 139 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 GAGE4Q13068 117 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 GAGE5Q13069 117 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 COTL1Q14019 142 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 DEFB121Q5J5C9 76 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 KPRPQ5T749 579 aaPredicted RBP4.33□□□□□ -1.72
LRRC47-203ENST00000479239 LINC01545Q5VT33 79 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 Q6ZN92 141 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 ERASQ7Z444 233 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 ATOH7Q8N100 152 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 Q8N3U1 123 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 PHLDA1Q8WV24 401 aaPredicted RBP4.33□□□□□ -1.72
LRRC47-203ENST00000479239 VAMP8Q9BV40 100 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 RETNQ9HD89 108 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 HHLA3Q9XRX5 114 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
LRRC47-203ENST00000479239 TRAV9-2A0A087WT02 112 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 UBE2D3P61077 147 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 PKIAP61925 76 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 UBE2D2P62837 147 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 RPL39P62891 51 aaKnown RBP4.32□□□□□ -1.72
LRRC47-203ENST00000479239 LGALS9CQ6DKI2 356 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 DAZ4Q86SG3 579 aaKnown RBP4.32□□□□□ -1.72
LRRC47-203ENST00000479239 C20orf203Q8NBC4 194 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 TMEM141Q96I45 108 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 PRO1933Q9H354 126 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 DAZ3Q9NR90 486 aaKnown RBP4.32□□□□□ -1.72
LRRC47-203ENST00000479239 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
LRRC47-203ENST00000479239 A0A087WX48 190 aa4.31□□□□□ -1.72
LRRC47-203ENST00000479239 TRAV12-1A0A0B4J245 112 aa4.31□□□□□ -1.72
LRRC47-203ENST00000479239 LOC100131303A0A0U1RQF7 123 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms