RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 KLK9Q9UKQ9 250 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 MUSTN1Q8IVN3 82 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 MTORP42345 2549 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
CCDC78-210ENST00000478979 A0A0B4J2C4 111 aa10.49□□□□□ -0.73
CCDC78-210ENST00000478979 TRBV10-2A0A0K0K1G8 114 aa10.48□□□□□ -0.73
CCDC78-210ENST00000478979 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
CCDC78-210ENST00000478979 DEFB136Q30KP8 78 aa10.48□□□□□ -0.73
CCDC78-210ENST00000478979 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
CCDC78-210ENST00000478979 JMJD1CQ15652 2540 aa10.48□□□□□ -0.73
CCDC78-210ENST00000478979 LGALS9O00182 355 aa10.48□□□□□ -0.73
CCDC78-210ENST00000478979 DUX3Q96PT4 197 aa10.48□□□□□ -0.73
CCDC78-210ENST00000478979 CHCHD5Q9BSY4 110 aa10.47□□□□□ -0.73
CCDC78-210ENST00000478979 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
CCDC78-210ENST00000478979 C2CD3Q4AC94 2353 aa10.47□□□□□ -0.73
CCDC78-210ENST00000478979 IGHV3-64A0A075B6Q5 118 aa10.47□□□□□ -0.73
CCDC78-210ENST00000478979 SPINK13Q1W4C9 94 aa10.47□□□□□ -0.73
CCDC78-210ENST00000478979 TRIAP1O43715 76 aa10.46□□□□□ -0.73
CCDC78-210ENST00000478979 ZNF876PQ49A33 203 aa10.46□□□□□ -0.73
CCDC78-210ENST00000478979 KHDC1LQ5JSQ8 128 aa10.46□□□□□ -0.73
CCDC78-210ENST00000478979 PRM2P04554 102 aa10.46□□□□□ -0.74
CCDC78-210ENST00000478979 C2orf82Q6UX34 121 aa10.46□□□□□ -0.74
CCDC78-210ENST00000478979 SPANXA1Q9NS26 97 aa10.46□□□□□ -0.74
CCDC78-210ENST00000478979 PPP1R17O96001 155 aa10.45□□□□□ -0.74
CCDC78-210ENST00000478979 KRTAP10-9P60411 292 aa10.45□□□□□ -0.74
CCDC78-210ENST00000478979 ZNF56Q15929 161 aa10.45□□□□□ -0.74
CCDC78-210ENST00000478979 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
CCDC78-210ENST00000478979 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
CCDC78-210ENST00000478979 LINC01600Q96MT4 127 aa10.45□□□□□ -0.74
CCDC78-210ENST00000478979 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
CCDC78-210ENST00000478979 ZNF256Q9Y2P7 627 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-210ENST00000478979 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.44□□□□□ -0.74
CCDC78-210ENST00000478979 DCANP1Q8TF63 244 aa10.44□□□□□ -0.74
CCDC78-210ENST00000478979 VPREB3Q9UKI3 123 aa10.44□□□□□ -0.74
CCDC78-210ENST00000478979 APCP25054 2843 aa10.44□□□□□ -0.74
CCDC78-210ENST00000478979 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
CCDC78-210ENST00000478979 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
CCDC78-210ENST00000478979 PSMB8P28062 276 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 OPRPNQ99935 248 aaPredicted RBP10.43□□□□□ -0.74
CCDC78-210ENST00000478979 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 ITPR3Q14573 2671 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 IGHV4OR15-8A0A075B7B6 117 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 A0A087WW49 117 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 H7C423 109 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 LEPROTO15243 131 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 ID1P41134 155 aa10.43□□□□□ -0.74
CCDC78-210ENST00000478979 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
CCDC78-210ENST00000478979 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 BBC3Q96PG8 261 aaPredicted RBP10.42□□□□□ -0.74
CCDC78-210ENST00000478979 LINC01587Q99440 93 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 H3BUA1 57 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 CFHR3Q02985 330 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 LINC01356Q8N9X3 169 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 LINC00315P59091 139 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
CCDC78-210ENST00000478979 C11orf44Q8N8P7 122 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 ZNF580Q9UK33 172 aa10.42□□□□□ -0.74
CCDC78-210ENST00000478979 VCYO14598 125 aa10.41□□□□□ -0.74
CCDC78-210ENST00000478979 SUMO4Q6EEV6 95 aa10.41□□□□□ -0.74
CCDC78-210ENST00000478979 KIF25-AS1Q9Y6Z4 181 aa10.41□□□□□ -0.74
CCDC78-210ENST00000478979 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 TMEM126AQ9H061 195 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 YAE1D1Q9NRH1 226 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 KNCNA6PVL3 124 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 M0R2P5 195 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 SLURP1P55000 103 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 POM121L12Q8N7R1 296 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 FAM19A4Q96LR4 140 aa10.4□□□□□ -0.74
CCDC78-210ENST00000478979 ADARB2-AS1A8MUL3 147 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 HOXD3P31249 432 aaPredicted RBP10.39□□□□□ -0.75
CCDC78-210ENST00000478979 ICOSQ9Y6W8 199 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 A0A0J9YXY3 114 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 MED14OSP0DP75 135 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 ZNF22P17026 224 aaPredicted RBP10.39□□□□□ -0.75
CCDC78-210ENST00000478979 SNRPD3P62318 126 aaKnown RBP10.39□□□□□ -0.75
CCDC78-210ENST00000478979 CLEC2BQ92478 149 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 KLLNB2CW77 178 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 H3BT86 120 aa10.39□□□□□ -0.75
CCDC78-210ENST00000478979 UBR5O95071 2799 aaPredicted RBP10.38□□□□□ -0.75
CCDC78-210ENST00000478979 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
CCDC78-210ENST00000478979 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
CCDC78-210ENST00000478979 FAM240AA0A1B0GVK7 77 aa10.38□□□□□ -0.75
CCDC78-210ENST00000478979 PRSS2P07478 247 aa10.38□□□□□ -0.75
CCDC78-210ENST00000478979 Q6ZSV7 163 aa10.38□□□□□ -0.75
CCDC78-210ENST00000478979 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
CCDC78-210ENST00000478979 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
CCDC78-210ENST00000478979 A0A0J9YXV3 536 aa10.37□□□□□ -0.75
CCDC78-210ENST00000478979 A0A0J9YX75 114 aa10.36□□□□□ -0.75
CCDC78-210ENST00000478979 CR1P17927 2039 aa10.36□□□□□ -0.75
CCDC78-210ENST00000478979 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
CCDC78-210ENST00000478979 TRBV27A0A0K0K1C4 114 aa10.36□□□□□ -0.75
CCDC78-210ENST00000478979 NXPH4O95158 308 aa10.36□□□□□ -0.75
CCDC78-210ENST00000478979 TMEM101Q96IK0 257 aa10.36□□□□□ -0.75
CCDC78-210ENST00000478979 COX6CP09669 75 aa10.35□□□□□ -0.75
CCDC78-210ENST00000478979 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
CCDC78-210ENST00000478979 LITAFQ99732 161 aa10.35□□□□□ -0.75
CCDC78-210ENST00000478979 K7EMT4 169 aa10.35□□□□□ -0.75
CCDC78-210ENST00000478979 DEFB131AP59861 70 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms