RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 LINC00477Q96M19 166 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 PACRGQ96M98 296 aaPredicted RBP0.84□□□□□ -2.27
SRRM1-211ENST00000478890 C18orf15Q96N68 181 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 SMR3AQ99954 134 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 GNB1LQ9BYB4 327 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 TMEM191AQ9H0A3 160 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 MS4A6AQ9H2W1 248 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 MAP1LC3AQ9H492 121 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 LINC00574Q9H8X3 128 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 ST20Q9HBF5 79 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 DAZ1Q9NQZ3 744 aaKnown RBP0.84□□□□□ -2.27
SRRM1-211ENST00000478890 DAZ3Q9NR90 486 aaKnown RBP0.84□□□□□ -2.27
SRRM1-211ENST00000478890 OSTCQ9NRP0 149 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 SMPXQ9UHP9 88 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 HSPB8Q9UJY1 196 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 KLK9Q9UKQ9 250 aa0.84□□□□□ -2.27
SRRM1-211ENST00000478890 TSSC4Q9Y5U2 329 aaPredicted RBP0.84□□□□□ -2.27
SRRM1-211ENST00000478890 PTPRBP23467 1997 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 EXPH5Q8NEV8 1989 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 TNRC6BQ9UPQ9 1833 aaKnown RBP0.84□□□□□ -2.28
SRRM1-211ENST00000478890 UTRNP46939 3433 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 HIVEP1P15822 2718 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 CPAMD8Q8IZJ3 1885 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 ARHGAP32A7KAX9 2087 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 BAHCC1Q9P281 2608 aa0.84□□□□□ -2.28
SRRM1-211ENST00000478890 NSD1Q96L73 2696 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TENM1Q9UKZ4 2725 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TANC2Q9HCD6 1990 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C2CD3Q4AC94 2353 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 WDFY4Q6ZS81 3184 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TNCP24821 2201 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 BRCA2P51587 3418 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 IGLV11-55A0A075B6I3 123 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV9-1A0A075B6T8 112 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 IGKV1OR2-108A0A075B7D4 117 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 LOC102724200A0A096LPH7 203 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV8-6A0A0B4J262 113 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV26-2A0A0B4J265 109 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV21A0A0B4J279 112 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM213A2RRL7 107 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C2orf70A6NJV1 201 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 COLCA2A8K830 154 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 D6R8Y8 96 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 NDUFC2-KCTD14E9PQ53 114 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 F5H768 121 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 H3BUA1 57 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 H7C2G1 150 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 K7EMT4 169 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 K7EN84 100 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 DEFB4AO15263 64 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 CRXO43186 299 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 GNRH2O43555 120 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 SNAI2O43623 268 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BKO60814 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 ZNF324O75467 553 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 SNCGO76070 127 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 DPM2O94777 84 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 NDUFA3O95167 84 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 LEPROTL1O95214 131 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 FSTL3O95633 263 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PPP1R17O96001 155 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 IGHG2P01859 326 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PPBPP02775 128 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BJP06899 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 CRYGCP07315 174 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 LGALS1P09382 135 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 LINC00614P0C842 121 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 LGALS3P17931 250 aaKnown RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BOP23527 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BBP33778 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 IFI27P40305 119 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PSMB2P49721 201 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HINT1P49773 126 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BDP58876 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 DEFB1P60022 68 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 DAD1P61803 113 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PKIAP61925 76 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST1H2BCP62807 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 SMAGPQ0VAQ4 97 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 EIF4EBP1Q13541 118 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 PDE6HQ13956 83 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 COTL1Q14019 142 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 JOSD1Q15040 202 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 VAMP3Q15836 100 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST2H2BEQ16778 126 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 SPINK13Q1W4C9 94 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 SPATA45Q537H7 98 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 ORMDL2Q53FV1 153 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.83□□□□□ -2.28
SRRM1-211ENST00000478890 DNLZQ5SXM8 178 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 CASC10Q5T4H9 136 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TMEM170BQ5T4T1 132 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 Q6AWC8 147 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 SLC25A34Q6PIV7 304 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 C10orf99Q6UWK7 81 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 TEX43Q6ZNM6 134 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 NEGR1Q7Z3B1 354 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 AMN1Q8IY45 258 aa0.83□□□□□ -2.28
SRRM1-211ENST00000478890 ORMDL3Q8N138 153 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms