RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 RPL36AP83881 106 aaKnown RBP8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 RPL36ALQ969Q0 106 aaKnown RBP8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 OVOL2Q9BRP0 275 aa8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 IGLV4-3A0A075B6K6 122 aa8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 TRBV7-3A0A075B6L6 115 aa8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 H3BRM9 83 aa8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
TRAF3IP3-213ENST00000478359 NF1P21359 2839 aa8.97□□□□□ -0.97
TRAF3IP3-213ENST00000478359 K7EQD1 137 aa8.97□□□□□ -0.97
TRAF3IP3-213ENST00000478359 Q6ZSN1 163 aa8.97□□□□□ -0.97
TRAF3IP3-213ENST00000478359 DAZ4Q86SG3 579 aaKnown RBP8.97□□□□□ -0.97
TRAF3IP3-213ENST00000478359 TM2D2Q9BX73 214 aa8.97□□□□□ -0.97
TRAF3IP3-213ENST00000478359 DAZ3Q9NR90 486 aaKnown RBP8.97□□□□□ -0.97
TRAF3IP3-213ENST00000478359 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.97
TRAF3IP3-213ENST00000478359 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.97
TRAF3IP3-213ENST00000478359 Q6ZTI0 123 aa8.96□□□□□ -0.97
TRAF3IP3-213ENST00000478359 AMELXQ99217 191 aa8.96□□□□□ -0.97
TRAF3IP3-213ENST00000478359 TIMM21Q9BVV7 248 aa8.96□□□□□ -0.97
TRAF3IP3-213ENST00000478359 WFDC10AQ9H1F0 79 aa8.96□□□□□ -0.97
TRAF3IP3-213ENST00000478359 WNK1Q9H4A3 2382 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 CEND1Q8N111 149 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 DEFB104AQ8WTQ1 72 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 ZNF479Q96JC4 524 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 CITED1Q99966 193 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
TRAF3IP3-213ENST00000478359 SMIM9A6NGZ8 99 aa8.95□□□□□ -0.98
TRAF3IP3-213ENST00000478359 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
TRAF3IP3-213ENST00000478359 MAPKAPK5-AS1Q8N8E1 139 aa8.95□□□□□ -0.98
TRAF3IP3-213ENST00000478359 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
TRAF3IP3-213ENST00000478359 MTORP42345 2549 aa8.95□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TRGV2A0A075B6R0 118 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TRBV6-4A0A1B0GX49 114 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 PLAC8L1A1L4L8 177 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GCSHP23434 173 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 PTTG1IPP53801 180 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 ZNRF2Q8NHG8 242 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 SMIM13P0DJ93 91 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 VAMP3Q15836 100 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 SCGB1D4Q6XE38 83 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 HIST1H4GQ99525 98 aa8.94□□□□□ -0.98
TRAF3IP3-213ENST00000478359 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
TRAF3IP3-213ENST00000478359 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TMEM223A0PJW6 202 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 C9orf118A6NHY6 69 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 LEPROTO15243 131 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 SLC25A29Q8N8R3 303 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 KIR2DL5BQ8NHK3 375 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 OPRPNQ99935 248 aaPredicted RBP8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GTSF1LQ9H1H1 148 aa8.92□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TMEM238LA0A1B0GVL6 79 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TINCRA0A1B0GVN0 87 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 A6NJY4 79 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 EMP1P54849 157 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 UBE2D3P61077 147 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 UBE2D2P62837 147 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 DGAT2L7PQ6IED9 249 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 PHLDA1Q8WV24 401 aaPredicted RBP8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GAGE12BA1L429 117 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 J3QQQ9 107 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GAGE7O76087 117 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 Q9UF83 564 aa8.91□□□□□ -0.98
TRAF3IP3-213ENST00000478359 TRGV4A0A0C4DH28 118 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 H7C423 109 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 FXYD2P54710 66 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 APOC4P55056 127 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 Q6ZVH6 145 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 SVIPQ8NHG7 77 aa8.9□□□□□ -0.98
TRAF3IP3-213ENST00000478359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 IGHV3-38A0A0C4DH36 116 aa8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 WIPF1O43516 503 aa8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 GTF2H5Q6ZYL4 71 aa8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 WFDC9Q8NEX5 89 aa8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 SPANXB1Q9NS25 103 aaPredicted RBP8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
TRAF3IP3-213ENST00000478359 LINC00612Q8N6U2 182 aa8.88□□□□□ -0.99
TRAF3IP3-213ENST00000478359 GAGE12JA6NER3 117 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 CCL25O15444 150 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 TIRAPP58753 221 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 GAGE4Q13068 117 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 GAGE5Q13069 117 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 GAGE13Q4V321 117 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 NHP2Q9NX24 153 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 A0A0J9YY99 117 aa8.87□□□□□ -0.99
TRAF3IP3-213ENST00000478359 UBE2L6O14933 153 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms