RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TPPP3Q9BW30 176 aa8.28□□□□□ -1.08
ABCF3-212ENST00000478288 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
ABCF3-212ENST00000478288 IGLV4-60A0A075B6I1 120 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 MT1HL1P0DM35 61 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 TAGLN2P37802 199 aaKnown RBP8.27□□□□□ -1.09
ABCF3-212ENST00000478288 NKX2-5P52952 324 aaPredicted RBP8.27□□□□□ -1.09
ABCF3-212ENST00000478288 CCL20P78556 96 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 WDR73Q6P4I2 378 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 OR2D3Q8NGH3 330 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 CNFNQ9BYD5 112 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 DPH3P1Q9H4G8 78 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 NIT2Q9NQR4 276 aa8.27□□□□□ -1.09
ABCF3-212ENST00000478288 PDE6DO43924 150 aa8.26□□□□□ -1.09
ABCF3-212ENST00000478288 GNG4P50150 75 aa8.26□□□□□ -1.09
ABCF3-212ENST00000478288 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
ABCF3-212ENST00000478288 BIN3Q9NQY0 253 aa8.26□□□□□ -1.09
ABCF3-212ENST00000478288 UBE2L6O14933 153 aa8.25□□□□□ -1.09
ABCF3-212ENST00000478288 SLPIP03973 132 aa8.25□□□□□ -1.09
ABCF3-212ENST00000478288 CTRLP40313 264 aa8.25□□□□□ -1.09
ABCF3-212ENST00000478288 BLOC1S1P78537 153 aa8.25□□□□□ -1.09
ABCF3-212ENST00000478288 MEF2BQ02080 365 aaPredicted RBP8.25□□□□□ -1.09
ABCF3-212ENST00000478288 LRP2P98164 4655 aa8.25□□□□□ -1.09
ABCF3-212ENST00000478288 A0A087WYN8 130 aa8.24□□□□□ -1.09
ABCF3-212ENST00000478288 BCL2P10415 239 aa8.24□□□□□ -1.09
ABCF3-212ENST00000478288 AMTP48728 403 aa8.24□□□□□ -1.09
ABCF3-212ENST00000478288 COTL1Q14019 142 aa8.24□□□□□ -1.09
ABCF3-212ENST00000478288 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
ABCF3-212ENST00000478288 PLAC8Q9NZF1 115 aa8.24□□□□□ -1.09
ABCF3-212ENST00000478288 TRBV20OR9-2A0A075B6H5 130 aa8.23□□□□□ -1.09
ABCF3-212ENST00000478288 NTF3P20783 257 aa8.23□□□□□ -1.09
ABCF3-212ENST00000478288 LYZL1Q6UWQ5 148 aa8.23□□□□□ -1.09
ABCF3-212ENST00000478288 ALKAL2Q6UX46 152 aa8.23□□□□□ -1.09
ABCF3-212ENST00000478288 C15orf56Q8N910 161 aa8.23□□□□□ -1.09
ABCF3-212ENST00000478288 NCR2O95944 276 aa8.22□□□□□ -1.09
ABCF3-212ENST00000478288 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
ABCF3-212ENST00000478288 MED9Q9NWA0 146 aa8.22□□□□□ -1.09
ABCF3-212ENST00000478288 GVQW2A0A096LPI5 108 aaPredicted RBP8.21□□□□□ -1.1
ABCF3-212ENST00000478288 RAB19A4D1S5 217 aa8.21□□□□□ -1.1
ABCF3-212ENST00000478288 H7C423 109 aa8.21□□□□□ -1.1
ABCF3-212ENST00000478288 C7orf33Q8WU49 177 aa8.21□□□□□ -1.1
ABCF3-212ENST00000478288 GAGE12HA6NDE8 117 aa8.2□□□□□ -1.1
ABCF3-212ENST00000478288 RPS10P46783 165 aaKnown RBP8.2□□□□□ -1.1
ABCF3-212ENST00000478288 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
ABCF3-212ENST00000478288 DPH3Q96FX2 82 aa8.2□□□□□ -1.1
ABCF3-212ENST00000478288 PHOX2AO14813 284 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
ABCF3-212ENST00000478288 COX6A2Q02221 97 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 TWIST1Q15672 202 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 PKIGQ9Y2B9 76 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 RNF213Q63HN8 5207 aa8.19□□□□□ -1.1
ABCF3-212ENST00000478288 ZNF25P17030 456 aaPredicted RBP8.18□□□□□ -1.1
ABCF3-212ENST00000478288 CHCHD10Q8WYQ3 142 aaPredicted RBP8.18□□□□□ -1.1
ABCF3-212ENST00000478288 FAM210AQ96ND0 272 aa8.18□□□□□ -1.1
ABCF3-212ENST00000478288 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
ABCF3-212ENST00000478288 APCSP02743 223 aa8.17□□□□□ -1.1
ABCF3-212ENST00000478288 AMMECR1LQ6DCA0 310 aa8.17□□□□□ -1.1
ABCF3-212ENST00000478288 EIF5A2Q9GZV4 153 aaKnown RBP8.17□□□□□ -1.1
ABCF3-212ENST00000478288 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
ABCF3-212ENST00000478288 TRAV26-2A0A0B4J265 109 aa8.16□□□□□ -1.1
ABCF3-212ENST00000478288 CEBPGP53567 150 aa8.16□□□□□ -1.1
ABCF3-212ENST00000478288 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
ABCF3-212ENST00000478288 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
ABCF3-212ENST00000478288 PRSS3P2Q8NHM4 247 aa8.16□□□□□ -1.1
ABCF3-212ENST00000478288 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
ABCF3-212ENST00000478288 IGKV3OR2-268A0A0C4DH90 116 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 TMEM250H0YL14 139 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 K7EN84 100 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 FGF6P10767 208 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 FOXI1Q12951 378 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 MAJINQ3KP22 176 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 HIGD2BQ4VC39 106 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 OR5A1Q8NGJ0 315 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 GTSF1Q8WW33 167 aa8.15□□□□□ -1.1
ABCF3-212ENST00000478288 RPL39LQ96EH5 51 aaKnown RBP8.15□□□□□ -1.1
ABCF3-212ENST00000478288 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
ABCF3-212ENST00000478288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.14□□□□□ -1.11
ABCF3-212ENST00000478288 IGKV2-29A2NJV5 120 aaPredicted RBP8.14□□□□□ -1.11
ABCF3-212ENST00000478288 RNASEKQ6P5S7 137 aaKnown RBP8.14□□□□□ -1.11
ABCF3-212ENST00000478288 STPG4Q8N801 248 aa8.14□□□□□ -1.11
ABCF3-212ENST00000478288 A0A096LNI7 61 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 IGKV2-24A0A0C4DH68 120 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 I3L3M4 83 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 CT83Q5H943 113 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 FAM231DQ6ZW35 169 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 BTF3L4Q96K17 158 aa8.13□□□□□ -1.11
ABCF3-212ENST00000478288 IGHV1-58A0A0C4DH39 117 aa8.12□□□□□ -1.11
ABCF3-212ENST00000478288 ESDP10768 282 aa8.12□□□□□ -1.11
ABCF3-212ENST00000478288 FOXA3P55318 350 aaPredicted RBP8.12□□□□□ -1.11
ABCF3-212ENST00000478288 TMEM101Q96IK0 257 aa8.12□□□□□ -1.11
ABCF3-212ENST00000478288 SMIM7Q9BQ49 75 aa8.12□□□□□ -1.11
ABCF3-212ENST00000478288 A0A0J9YXV3 536 aa8.11□□□□□ -1.11
ABCF3-212ENST00000478288 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms