RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZNF688P0C7X2 276 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 FABP2P12104 132 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
SF3B6-202ENST00000478050 FXYD2P54710 66 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 HERVK_113P61574 105 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 Q5PR19 223 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 SUMO4Q6EEV6 95 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 FOXI2Q6ZQN5 318 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 RNASE8Q8TDE3 154 aaKnown RBP3.65□□□□□ -1.83
SF3B6-202ENST00000478050 TMEM141Q96I45 108 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 UBE2E2Q96LR5 201 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 KIR2DL4Q99706 377 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 CST9LQ9H4G1 147 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF702PQ9H963 129 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 TRBV7-3A0A075B6L6 115 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 TRAV2A0A0B4J234 112 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 MYMXA0A1B0GTQ4 84 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 K7ERU9 68 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 IGHV4-31P0DP07 118 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 RBX1P62877 108 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 PMVKQ15126 192 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 RHOHQ15669 191 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 ZFP2Q6ZN57 461 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 TRPT1Q86TN4 253 aaKnown RBP3.64□□□□□ -1.83
SF3B6-202ENST00000478050 LRRC75A-AS1Q8N1F1 130 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 MAPKAPK5-AS1Q8N8E1 139 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 RAB37Q96AX2 223 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 TIMM17AQ99595 171 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF256Q9Y2P7 627 aaPredicted RBP3.64□□□□□ -1.83
SF3B6-202ENST00000478050 SPCS1Q9Y6A9 102 aa3.64□□□□□ -1.83
SF3B6-202ENST00000478050 NACAE9PAV3 2078 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 SDHAF1A6NFY7 115 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 IGIPA6NJ69 53 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 A8MTW9 85 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 HOXD3P31249 432 aaPredicted RBP3.63□□□□□ -1.83
SF3B6-202ENST00000478050 SYNJ2BPP57105 145 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF56Q15929 161 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 NSUN5P1Q3KNT7 163 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 C10orf99Q6UWK7 81 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 Q8N2B8 174 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 TEX29Q8N6K0 151 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 PHLDA1Q8WV24 401 aaPredicted RBP3.63□□□□□ -1.83
SF3B6-202ENST00000478050 HIST1H4GQ99525 98 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 PRADC1Q9BSG0 188 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 TTTY13Q9BZ97 58 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 JPT2Q9H910 190 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 NHP2Q9NX24 153 aaKnown RBP3.63□□□□□ -1.83
SF3B6-202ENST00000478050 TP53TG1Q9Y2A0 90 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 SELENOKQ9Y6D0 94 aa3.63□□□□□ -1.83
SF3B6-202ENST00000478050 IGLV4-69A0A075B6H9 119 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 TRAV12-2A0A075B6T6 113 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 A0A1B0GWB2 263 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 C11orf86A6NJI1 115 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF815PA8K554 130 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 IGLL5B9A064 214 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 M0QY20 66 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 TSHBP01222 138 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 IGKV3-20P01619 116 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 CRYGDP07320 174 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 SCGB2A2Q13296 93 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 SPINK13Q1W4C9 94 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 C12orf74Q32Q52 190 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 TCTEX1D4Q5JR98 221 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 PIK3CD-AS1Q5SR53 167 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 AMTNQ6UX39 209 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 NEGR1Q7Z3B1 354 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 TMEM86BQ8N661 226 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 PTH2Q96A98 100 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 DUX5Q96PT3 197 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 NAA38Q9BRA0 125 aaKnown RBP3.62□□□□□ -1.83
SF3B6-202ENST00000478050 KRTAP1-5Q9BYS1 174 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 MDFICQ9P1T7 246 aa3.62□□□□□ -1.83
SF3B6-202ENST00000478050 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 A8MWV9 139 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 I3L3M4 83 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 K7ERJ3 54 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 DEFB131AP59861 70 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF415Q09FC8 603 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 RRN3P1Q2M238 152 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF876PQ49A33 203 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 FAM74A4Q5TZK3 123 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 MORN3Q6PF18 240 aaPredicted RBP3.61□□□□□ -1.83
SF3B6-202ENST00000478050 NFE4Q86UQ8 179 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 C3orf56Q8N813 242 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 MAPK1IP1LQ8NDC0 245 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 C4orf3Q8WVX3 66 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 ZNF479Q96JC4 524 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 SPAG8Q99932 426 aaPredicted RBP3.61□□□□□ -1.83
SF3B6-202ENST00000478050 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 LINC00467Q9BRT7 94 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 YAE1D1Q9NRH1 226 aa3.61□□□□□ -1.83
SF3B6-202ENST00000478050 SPANXB1Q9NS25 103 aaPredicted RBP3.61□□□□□ -1.83
SF3B6-202ENST00000478050 KNCNA6PVL3 124 aa3.6□□□□□ -1.83
SF3B6-202ENST00000478050 H3BMM0 161 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms