RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 UBE2L6O14933 153 aa9.03□□□□□ -0.96
HDAC7-222ENST00000477937 SRP19P09132 144 aaKnown RBP9.03□□□□□ -0.96
HDAC7-222ENST00000477937 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
HDAC7-222ENST00000477937 AMTP48728 403 aa9.03□□□□□ -0.96
HDAC7-222ENST00000477937 REG3AQ06141 175 aa9.03□□□□□ -0.96
HDAC7-222ENST00000477937 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
HDAC7-222ENST00000477937 DEFB104AQ8WTQ1 72 aa9.03□□□□□ -0.96
HDAC7-222ENST00000477937 ABCA13Q86UQ4 5058 aa9.02□□□□□ -0.97
HDAC7-222ENST00000477937 USP17L23D6RBM5 183 aa9.02□□□□□ -0.97
HDAC7-222ENST00000477937 C20orf203Q8NBC4 194 aa9.02□□□□□ -0.97
HDAC7-222ENST00000477937 TSKUQ8WUA8 353 aa9.02□□□□□ -0.97
HDAC7-222ENST00000477937 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
HDAC7-222ENST00000477937 OSTCQ9NRP0 149 aa9.02□□□□□ -0.97
HDAC7-222ENST00000477937 IGLV4-60A0A075B6I1 120 aa9.01□□□□□ -0.97
HDAC7-222ENST00000477937 TRAV8-4A0A0B4J246 113 aa9.01□□□□□ -0.97
HDAC7-222ENST00000477937 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
HDAC7-222ENST00000477937 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 A0A1B0GUT8 65 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 FAM231BA6NCW3 169 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 HIGD1CA8MV81 97 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 TMEM241Q24JQ0 296 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 FAM74A3Q4VXF1 159 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 KRTAP26-1Q6PEX3 210 aa9□□□□□ -0.97
HDAC7-222ENST00000477937 NCR2O95944 276 aa8.99□□□□□ -0.97
HDAC7-222ENST00000477937 DGAT2L7PQ6IED9 249 aa8.99□□□□□ -0.97
HDAC7-222ENST00000477937 SDHAF1A6NFY7 115 aa8.98□□□□□ -0.97
HDAC7-222ENST00000477937 PRSS1P07477 247 aa8.98□□□□□ -0.97
HDAC7-222ENST00000477937 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
HDAC7-222ENST00000477937 TRBV6-5A0A0K0K1A5 114 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 H7C423 109 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 APCSP02743 223 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 PMCHP20382 165 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 PEA15Q15121 130 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 SCXQ7RTU7 201 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 CLRN3Q8NCR9 226 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 ISOC2Q96AB3 205 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 CHAC1Q9BUX1 264 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 V9GYV3 84 aa8.97□□□□□ -0.97
HDAC7-222ENST00000477937 I3L3M4 83 aa8.96□□□□□ -0.98
HDAC7-222ENST00000477937 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.98
HDAC7-222ENST00000477937 RPL23P62829 140 aaKnown RBP8.96□□□□□ -0.98
HDAC7-222ENST00000477937 RIGQ13278 110 aa8.96□□□□□ -0.98
HDAC7-222ENST00000477937 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.98
HDAC7-222ENST00000477937 ST20Q9HBF5 79 aa8.96□□□□□ -0.98
HDAC7-222ENST00000477937 NAT8Q9UHE5 227 aa8.96□□□□□ -0.98
HDAC7-222ENST00000477937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-222ENST00000477937 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
HDAC7-222ENST00000477937 C9JQL5 133 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 RAB4AP20338 218 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 ADIRFQ15847 76 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 MRAP2Q96G30 205 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 RNF185Q96GF1 192 aa8.95□□□□□ -0.98
HDAC7-222ENST00000477937 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
HDAC7-222ENST00000477937 GAS8-AS1O95177 125 aa8.94□□□□□ -0.98
HDAC7-222ENST00000477937 FGF6P10767 208 aa8.94□□□□□ -0.98
HDAC7-222ENST00000477937 RNASEKQ6P5S7 137 aaKnown RBP8.94□□□□□ -0.98
HDAC7-222ENST00000477937 AMN1Q8IY45 258 aa8.94□□□□□ -0.98
HDAC7-222ENST00000477937 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
HDAC7-222ENST00000477937 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
HDAC7-222ENST00000477937 SRSF3P84103 164 aaKnown RBP8.93□□□□□ -0.98
HDAC7-222ENST00000477937 CIRBP-AS1Q8TBR5 109 aa8.93□□□□□ -0.98
HDAC7-222ENST00000477937 PPP1R17O96001 155 aa8.92□□□□□ -0.98
HDAC7-222ENST00000477937 TSHBP01222 138 aa8.92□□□□□ -0.98
HDAC7-222ENST00000477937 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
HDAC7-222ENST00000477937 POLR2KP53803 58 aaKnown RBP8.92□□□□□ -0.98
HDAC7-222ENST00000477937 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
HDAC7-222ENST00000477937 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
HDAC7-222ENST00000477937 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
HDAC7-222ENST00000477937 SRRM2Q9UQ35 2752 aaKnown RBP8.92□□□□□ -0.98
HDAC7-222ENST00000477937 TRBV27A0A0K0K1C4 114 aa8.91□□□□□ -0.98
HDAC7-222ENST00000477937 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
HDAC7-222ENST00000477937 ESDP10768 282 aa8.91□□□□□ -0.98
HDAC7-222ENST00000477937 RPS10P46783 165 aaKnown RBP8.91□□□□□ -0.98
HDAC7-222ENST00000477937 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
HDAC7-222ENST00000477937 CFAP161Q6P656 301 aa8.91□□□□□ -0.98
HDAC7-222ENST00000477937 TMEM242Q9NWH2 141 aa8.91□□□□□ -0.98
HDAC7-222ENST00000477937 VPS13BQ7Z7G8 4022 aa8.9□□□□□ -0.98
HDAC7-222ENST00000477937 FAT1Q14517 4588 aa8.9□□□□□ -0.98
HDAC7-222ENST00000477937 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-222ENST00000477937 SMIM27A0A1W2PRY6 76 aa8.9□□□□□ -0.98
HDAC7-222ENST00000477937 VCYO14598 125 aa8.9□□□□□ -0.98
HDAC7-222ENST00000477937 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.98
HDAC7-222ENST00000477937 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.98
HDAC7-222ENST00000477937 DNAH8Q96JB1 4490 aa8.9□□□□□ -0.99
HDAC7-222ENST00000477937 A0A1B0GW15 77 aa8.89□□□□□ -0.99
HDAC7-222ENST00000477937 SMKR1H3BMG3 65 aa8.89□□□□□ -0.99
HDAC7-222ENST00000477937 SDIM1Q6ZPB5 146 aa8.89□□□□□ -0.99
HDAC7-222ENST00000477937 C7orf77A4D0Y5 90 aa8.88□□□□□ -0.99
HDAC7-222ENST00000477937 FCER1GP30273 86 aa8.88□□□□□ -0.99
HDAC7-222ENST00000477937 CAMPP49913 170 aa8.88□□□□□ -0.99
HDAC7-222ENST00000477937 SUMO2P61956 95 aaKnown RBP8.88□□□□□ -0.99
HDAC7-222ENST00000477937 FAM104BQ5XKR9 115 aa8.88□□□□□ -0.99
HDAC7-222ENST00000477937 KIR2DL4Q99706 377 aa8.88□□□□□ -0.99
HDAC7-222ENST00000477937 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
HDAC7-222ENST00000477937 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
HDAC7-222ENST00000477937 LINC00862A6NCI5 91 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms