RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 AP1S3Q96PC3 154 aa4.72□□□□□ -1.65
BRCA1-214ENST00000477152 BATF3Q9NR55 127 aa4.72□□□□□ -1.65
BRCA1-214ENST00000477152 XKRY2A2RUG3 117 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 UMAD1C9J7I0 102 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 CRIP1P50238 77 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 RPS20P60866 119 aaKnown RBP4.71□□□□□ -1.66
BRCA1-214ENST00000477152 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 PKIGQ9Y2B9 76 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 IGHV1-24A0A0C4DH33 117 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 TEX46H3BTG2 121 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 OR5AL1P0C617 328 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 ZNF726P1Q15940 193 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 LINC01620Q4KN68 170 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 C9orf163Q8N9P6 203 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 RNF185Q96GF1 192 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 DERL1Q9BUN8 251 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 BIN3Q9NQY0 253 aa4.71□□□□□ -1.66
BRCA1-214ENST00000477152 CACNG7P62955 275 aa4.7□□□□□ -1.66
BRCA1-214ENST00000477152 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-214ENST00000477152 MPV17L2Q567V2 206 aa4.7□□□□□ -1.66
BRCA1-214ENST00000477152 PRR27Q6MZM9 219 aa4.7□□□□□ -1.66
BRCA1-214ENST00000477152 ENHOQ6UWT2 76 aa4.7□□□□□ -1.66
BRCA1-214ENST00000477152 VAX2Q9UIW0 290 aa4.7□□□□□ -1.66
BRCA1-214ENST00000477152 IGHV3-64A0A075B6Q5 118 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 UBE2L6O14933 153 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 SNAI2O43623 268 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 Q6ZRU5 148 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 SFT2D1Q8WV19 159 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 Q9UF83 564 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 HERC1Q15751 4861 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 ARPC5O15511 151 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 TRGC1P0CF51 173 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 LINC00269Q8N2A0 174 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 PRR34Q9NV39 138 aa4.69□□□□□ -1.66
BRCA1-214ENST00000477152 KANTRA0A1W2PQU2 76 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 F2Z2F3 143 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 PRSS1P07477 247 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 RBX1P62877 108 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 REG3AQ06141 175 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 GAGE6Q13070 117 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 IQCJQ1A5X6 159 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 KCNRGQ8N5I3 272 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 FAM213BQ8TBF2 198 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 C7orf33Q8WU49 177 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 MBD3L1Q8WWY6 194 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 TMEM243Q9BU79 118 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 MANBALQ9NQG1 85 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 FAT1Q14517 4588 aa4.68□□□□□ -1.66
BRCA1-214ENST00000477152 A0A1B0GUV1 79 aa4.67□□□□□ -1.66
BRCA1-214ENST00000477152 MGPP08493 103 aa4.67□□□□□ -1.66
BRCA1-214ENST00000477152 CNBPP62633 177 aaKnown RBP4.67□□□□□ -1.66
BRCA1-214ENST00000477152 ZNF345Q14585 488 aa4.67□□□□□ -1.66
BRCA1-214ENST00000477152 EIF5AL1Q6IS14 154 aaKnown RBP4.67□□□□□ -1.66
BRCA1-214ENST00000477152 TMUB2Q71RG4 321 aa4.67□□□□□ -1.66
BRCA1-214ENST00000477152 SMIM12Q96EX1 92 aa4.67□□□□□ -1.66
BRCA1-214ENST00000477152 FER1L6-AS1Q8NA97 138 aa4.67□□□□□ -1.66
BRCA1-214ENST00000477152 IFNA1P01562 189 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 SULT1A2P50226 295 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 SSTP61278 116 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 COTL1Q14019 142 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 Q5BKY6 102 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 RASL11AQ6T310 242 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 SMIM15Q7Z3B0 74 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 PGLYRP4Q96LB8 373 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 TPPP3Q9BW30 176 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
BRCA1-214ENST00000477152 RAB5CP51148 216 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 KRTAP10-4P60372 401 aaPredicted RBP4.65□□□□□ -1.66
BRCA1-214ENST00000477152 GAGE2BQ13066 116 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 RGS21Q2M5E4 152 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 GAGE2EQ4V326 116 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 GAGE2AQ6NT46 116 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 CLPSL2Q6UWE3 100 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 SDIM1Q6ZPB5 146 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 NIT2Q9NQR4 276 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 GAGE2DQ9UEU5 116 aa4.65□□□□□ -1.66
BRCA1-214ENST00000477152 RPL35P42766 123 aaKnown RBP4.65□□□□□ -1.67
BRCA1-214ENST00000477152 GNG4P50150 75 aa4.65□□□□□ -1.67
BRCA1-214ENST00000477152 AMMECR1LQ6DCA0 310 aa4.65□□□□□ -1.67
BRCA1-214ENST00000477152 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.67
BRCA1-214ENST00000477152 OR2D3Q8NGH3 330 aa4.65□□□□□ -1.67
BRCA1-214ENST00000477152 CYTL1Q9NRR1 136 aa4.65□□□□□ -1.67
BRCA1-214ENST00000477152 LINC00474Q9P2X8 69 aa4.65□□□□□ -1.67
BRCA1-214ENST00000477152 IGLV10-54A0A075B6I4 117 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 HMSDA8MTL9 139 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 H7C423 109 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 M0QY20 66 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 PDE6DO43924 150 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 TAGLN2P37802 199 aaKnown RBP4.64□□□□□ -1.67
BRCA1-214ENST00000477152 TEX261Q6UWH6 196 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 FAM210AQ96ND0 272 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 KIF25-AS1Q9Y6Z4 181 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 MUC21A0A0G2JKD1 596 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 MUC21A0A140T8X8 626 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 A0A1B0GV50 99 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 BCL2L11O43521 198 aa4.64□□□□□ -1.67
BRCA1-214ENST00000477152 NCR2O95944 276 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms