RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 C9orf116Q5BN46 136 aaPredicted RBP-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 SCIMPQ6UWF3 145 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 ZNF818PQ6ZRF7 136 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 VSTM2AQ8TAG5 236 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 ATP6V1G3Q96LB4 118 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 CARD19Q96LW7 228 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 RPRMQ9NS64 109 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 CBLN4Q9NTU7 201 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 ARL2BPQ9Y2Y0 163 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 ATP6V1DQ9Y5K8 247 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 SHANK2Q9UPX8 1470 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 MYH8P13535 1937 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 MYH2Q9UKX2 1941 aa-0.7□□□□□ -2.52
RPL39P34-201ENST00000477141 PATJQ8NI35 1801 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 RAPGEF6Q8TEU7 1601 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 DAPK1P53355 1430 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 YTHDC2Q9H6S0 1430 aaKnown RBP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 CCDC141Q6ZP82 1450 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 CPSF4LA6NMK7 179 aaKnown RBP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 F8VRH5 84 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 H0YAA0 97 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 M0R135 149 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 ARPC5O15511 151 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 PITX3O75364 302 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 PPP1R17O96001 155 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 APOC3P02656 99 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 SLC25A5P05141 298 aaKnown RBP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 TPM3P06753 285 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 CRYBA4P53673 196 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 TPM4P67936 248 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 CCL7P80098 99 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 SPANXN1Q5VSR9 72 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 RPL7L1Q6DKI1 246 aaKnown RBP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 DCUN1D2Q6PH85 259 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 ATP11AUNQ6ZP68 121 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 TMED4Q7Z7H5 227 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 Q8N8P6 123 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 OR13C6PQ8NH95 151 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 C10orf82Q8WW14 230 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 AMELXQ99217 191 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 GINS3Q9BRX5 216 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 NDUFA4L2Q9NRX3 87 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 NDUFA12Q9UI09 145 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 STOML2Q9UJZ1 356 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 ANKRD11Q6UB99 2663 aaPredicted RBP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 DNHD1Q96M86 4753 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 TEX15Q9BXT5 2789 aa-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 CICQ96RK0 1608 aaPredicted RBP-0.71□□□□□ -2.52
RPL39P34-201ENST00000477141 QRICH2Q9H0J4 1663 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 ZFYVE9O95405 1425 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 A0A0G2JMZ2 1700 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 KNDC1Q76NI1 1749 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 MGAM2Q2M2H8 2515 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 MAGI1Q96QZ7 1491 aaPredicted RBP-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 COL14A1Q05707 1796 aaKnown RBP-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 ACACAQ13085 2346 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 PRRC2CQ9Y520 2896 aaKnown RBP-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 VPS13BQ7Z7G8 4022 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 A6NIN4 97 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 M0QZK8 103 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 PFDN1O60925 122 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 NIPSNAP2O75323 286 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 FAM107AO95990 144 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 TCRAP04437 139 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 TPPP2P59282 170 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 DEFB1P60022 68 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 UBE2D3P61077 147 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 UBE2D2P62837 147 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 LINC01545Q5VT33 79 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 Q6AWC8 147 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 BAGE2Q86Y30 109 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 FAM24BQ8N5W8 94 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 DYDC1Q8WWB3 177 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 PRAP1Q96NZ9 151 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 SS18L2Q9UHA2 77 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 MED31Q9Y3C7 131 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 LENEPQ9Y5L5 61 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 LINC00312Q9Y6C7 94 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 V9GYH0 126 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 LAMA3Q16787 3333 aa-0.72□□□□□ -2.52
RPL39P34-201ENST00000477141 RIMS1Q86UR5 1692 aaKnown RBP-0.72□□□□□ -2.53
RPL39P34-201ENST00000477141 DNAH2Q9P225 4427 aa-0.72□□□□□ -2.53
RPL39P34-201ENST00000477141 MARF1Q9Y4F3 1742 aaKnown RBP-0.72□□□□□ -2.53
RPL39P34-201ENST00000477141 AKAP9Q99996 3911 aa-0.72□□□□□ -2.53
RPL39P34-201ENST00000477141 NKTRP30414 1462 aaKnown RBP-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 PLB1Q6P1J6 1458 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 KNL1Q8NG31 2342 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 LINC00959A0A1B0GUT2 108 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 UQCR11O14957 56 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 SMIM24O75264 130 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 IFNA1P01562 189 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 MT1HL1P0DM35 61 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 RPL7P18124 248 aaKnown RBP-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 TCTAP57738 103 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 B2MP61769 119 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 CCL8P80075 99 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 MT1XP80297 61 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 CLLU1Q5K131 121 aa-0.73□□□□□ -2.53
RPL39P34-201ENST00000477141 HRCT1Q6UXD1 115 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms