RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 CMC4P56277 68 aaPredicted RBP8.3□□□□□ -1.08
NUP188-205ENST00000477069 SETXQ7Z333 2677 aaKnown RBP8.29□□□□□ -1.08
NUP188-205ENST00000477069 OTOGQ6ZRI0 2925 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 IGLV4-3A0A075B6K6 122 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 TRBV7-3A0A075B6L6 115 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 GCSHP23434 173 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 EMP1P54849 157 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 PHLDA1Q8WV24 401 aaPredicted RBP8.29□□□□□ -1.08
NUP188-205ENST00000477069 DNAJC30Q96LL9 226 aa8.29□□□□□ -1.08
NUP188-205ENST00000477069 CHCHD7Q9BUK0 85 aa8.28□□□□□ -1.08
NUP188-205ENST00000477069 TNFRSF18Q9Y5U5 241 aa8.28□□□□□ -1.08
NUP188-205ENST00000477069 WFDC10AQ9H1F0 79 aa8.28□□□□□ -1.08
NUP188-205ENST00000477069 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.09
NUP188-205ENST00000477069 AMELXQ99217 191 aa8.27□□□□□ -1.09
NUP188-205ENST00000477069 NDUFA11Q86Y39 141 aa8.27□□□□□ -1.09
NUP188-205ENST00000477069 PLAC8L1A1L4L8 177 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 IGHV3OR16-12A0A075B7B8 117 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 CSNK1G2-AS1Q8NCQ2 148 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 FASNP49327 2511 aaKnown RBP8.26□□□□□ -1.09
NUP188-205ENST00000477069 ZNF815PA8K554 130 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 SMIM13P0DJ93 91 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 CRYBA4P53673 196 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 HERVK_113P61574 105 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 PLEKHB2Q96CS7 222 aa8.26□□□□□ -1.09
NUP188-205ENST00000477069 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
NUP188-205ENST00000477069 H3BUT2 72 aa8.25□□□□□ -1.09
NUP188-205ENST00000477069 WNK1Q9H4A3 2382 aa8.25□□□□□ -1.09
NUP188-205ENST00000477069 K7ERJ3 54 aa8.25□□□□□ -1.09
NUP188-205ENST00000477069 RAB37Q96AX2 223 aa8.25□□□□□ -1.09
NUP188-205ENST00000477069 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
NUP188-205ENST00000477069 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
NUP188-205ENST00000477069 DAZ2Q13117 558 aaKnown RBP8.24□□□□□ -1.09
NUP188-205ENST00000477069 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 Q6ZTI0 123 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 OR4C5Q8NGB2 326 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 TRGV1A0A0A0MS02 117 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 A0A1B0GWB2 263 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 OR5A1Q8NGJ0 315 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 ZNF479Q96JC4 524 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 HIST1H4GQ99525 98 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 VCX2Q9H322 139 aa8.24□□□□□ -1.09
NUP188-205ENST00000477069 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 CEMP1Q6PRD7 247 aaPredicted RBP8.23□□□□□ -1.09
NUP188-205ENST00000477069 NAA38Q9BRA0 125 aaKnown RBP8.23□□□□□ -1.09
NUP188-205ENST00000477069 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
NUP188-205ENST00000477069 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
NUP188-205ENST00000477069 SPANXA1Q9NS26 97 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 MTORP42345 2549 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 BAHCC1Q9P281 2608 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 A0A0J9YY99 117 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 K7EP34 96 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 C16orf74Q96GX8 76 aa8.23□□□□□ -1.09
NUP188-205ENST00000477069 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
NUP188-205ENST00000477069 LEPROTO15243 131 aa8.22□□□□□ -1.09
NUP188-205ENST00000477069 RPL35AP18077 110 aaKnown RBP8.22□□□□□ -1.09
NUP188-205ENST00000477069 C12orf74Q32Q52 190 aa8.22□□□□□ -1.09
NUP188-205ENST00000477069 INAFM1C9JVW0 142 aa8.22□□□□□ -1.09
NUP188-205ENST00000477069 J3QQQ9 107 aa8.22□□□□□ -1.09
NUP188-205ENST00000477069 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.21□□□□□ -1.09
NUP188-205ENST00000477069 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.09
NUP188-205ENST00000477069 IGKV2-29A2NJV5 120 aaPredicted RBP8.21□□□□□ -1.09
NUP188-205ENST00000477069 K7EQD1 137 aa8.21□□□□□ -1.09
NUP188-205ENST00000477069 OVOL2Q9BRP0 275 aa8.21□□□□□ -1.09
NUP188-205ENST00000477069 C1QTNF4Q9BXJ3 329 aa8.21□□□□□ -1.09
NUP188-205ENST00000477069 SPANXB1Q9NS25 103 aaPredicted RBP8.21□□□□□ -1.09
NUP188-205ENST00000477069 SAMD5Q5TGI4 173 aa8.21□□□□□ -1.1
NUP188-205ENST00000477069 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
NUP188-205ENST00000477069 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
NUP188-205ENST00000477069 OCIAD2Q56VL3 154 aa8.2□□□□□ -1.1
NUP188-205ENST00000477069 SCGB1D4Q6XE38 83 aa8.2□□□□□ -1.1
NUP188-205ENST00000477069 Q6ZUT4 128 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 GTF2H5Q6ZYL4 71 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 IGLL5B9A064 214 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 PF4P02776 101 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 UBE2D3P61077 147 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 UBE2D2P62837 147 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 RNASE13Q5GAN3 156 aaKnown RBP8.19□□□□□ -1.1
NUP188-205ENST00000477069 TINCRA0A1B0GVN0 87 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 UBE2D1P51668 147 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
NUP188-205ENST00000477069 HIVEP2P31629 2446 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 LGALS3P17931 250 aaKnown RBP8.18□□□□□ -1.1
NUP188-205ENST00000477069 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 SBSPONQ8IVN8 264 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 SPCS1Q9Y6A9 102 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 HECTD1Q9ULT8 2610 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 FABP2P12104 132 aa8.18□□□□□ -1.1
NUP188-205ENST00000477069 DAZ4Q86SG3 579 aaKnown RBP8.18□□□□□ -1.1
NUP188-205ENST00000477069 DAZ3Q9NR90 486 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms