RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 FAT1Q14517 4588 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 FAM229AH3BQW9 127 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 UBE2L6O14933 153 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 AMTP48728 403 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 REG3AQ06141 175 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 C20orf203Q8NBC4 194 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 RPL39LQ96EH5 51 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
RAPGEF3-208ENST00000476259 IGLV4-60A0A075B6I1 120 aa11.68□□□□□ -0.54
RAPGEF3-208ENST00000476259 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
RAPGEF3-208ENST00000476259 USP17L23D6RBM5 183 aa11.68□□□□□ -0.54
RAPGEF3-208ENST00000476259 INAFM2P0DMQ5 153 aa11.68□□□□□ -0.54
RAPGEF3-208ENST00000476259 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
RAPGEF3-208ENST00000476259 OSTCQ9NRP0 149 aa11.68□□□□□ -0.54
RAPGEF3-208ENST00000476259 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
RAPGEF3-208ENST00000476259 KRTAP26-1Q6PEX3 210 aa11.67□□□□□ -0.54
RAPGEF3-208ENST00000476259 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
RAPGEF3-208ENST00000476259 GFRA4Q9GZZ7 299 aa11.67□□□□□ -0.54
RAPGEF3-208ENST00000476259 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
RAPGEF3-208ENST00000476259 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
RAPGEF3-208ENST00000476259 FAM231BA6NCW3 169 aa11.65□□□□□ -0.54
RAPGEF3-208ENST00000476259 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 SDHAF1A6NFY7 115 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 NCR2O95944 276 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 TMEM241Q24JQ0 296 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 FAM74A3Q4VXF1 159 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 ISOC2Q96AB3 205 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 V9GYV3 84 aa11.64□□□□□ -0.55
RAPGEF3-208ENST00000476259 PRSS1P07477 247 aa11.63□□□□□ -0.55
RAPGEF3-208ENST00000476259 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-208ENST00000476259 TMEM191AQ9H0A3 160 aa11.63□□□□□ -0.55
RAPGEF3-208ENST00000476259 C9JQL5 133 aa11.62□□□□□ -0.55
RAPGEF3-208ENST00000476259 APCSP02743 223 aa11.62□□□□□ -0.55
RAPGEF3-208ENST00000476259 SCXQ7RTU7 201 aa11.62□□□□□ -0.55
RAPGEF3-208ENST00000476259 VPS13BQ7Z7G8 4022 aa11.62□□□□□ -0.55
RAPGEF3-208ENST00000476259 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 GAS8-AS1O95177 125 aa11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 SRSF3P84103 164 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 PEA15Q15121 130 aa11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 ADIRFQ15847 76 aa11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 AMMECR1LQ6DCA0 310 aa11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 NAT8Q9UHE5 227 aa11.61□□□□□ -0.55
RAPGEF3-208ENST00000476259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 I3L3M4 83 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 PMCHP20382 165 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 NUP35Q8NFH5 326 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 RNF185Q96GF1 192 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 ST20Q9HBF5 79 aa11.6□□□□□ -0.55
RAPGEF3-208ENST00000476259 H7C423 109 aa11.59□□□□□ -0.55
RAPGEF3-208ENST00000476259 RAB4AP20338 218 aa11.59□□□□□ -0.55
RAPGEF3-208ENST00000476259 RIGQ13278 110 aa11.59□□□□□ -0.55
RAPGEF3-208ENST00000476259 RNASEKQ6P5S7 137 aaKnown RBP11.59□□□□□ -0.55
RAPGEF3-208ENST00000476259 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
RAPGEF3-208ENST00000476259 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
RAPGEF3-208ENST00000476259 SRRM2Q9UQ35 2752 aaKnown RBP11.58□□□□□ -0.56
RAPGEF3-208ENST00000476259 IGKV3OR2-268A0A0C4DH90 116 aa11.58□□□□□ -0.56
RAPGEF3-208ENST00000476259 MRAP2Q96G30 205 aa11.58□□□□□ -0.56
RAPGEF3-208ENST00000476259 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
RAPGEF3-208ENST00000476259 NAT8BQ9UHF3 227 aa11.58□□□□□ -0.56
RAPGEF3-208ENST00000476259 PLA2G1BP04054 148 aaKnown RBP11.57□□□□□ -0.56
RAPGEF3-208ENST00000476259 FGF6P10767 208 aa11.57□□□□□ -0.56
RAPGEF3-208ENST00000476259 RPS10P46783 165 aaKnown RBP11.57□□□□□ -0.56
RAPGEF3-208ENST00000476259 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
RAPGEF3-208ENST00000476259 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
RAPGEF3-208ENST00000476259 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
RAPGEF3-208ENST00000476259 TSHBP01222 138 aa11.56□□□□□ -0.56
RAPGEF3-208ENST00000476259 TMEM242Q9NWH2 141 aa11.56□□□□□ -0.56
RAPGEF3-208ENST00000476259 GAGE12HA6NDE8 117 aa11.55□□□□□ -0.56
RAPGEF3-208ENST00000476259 SMKR1H3BMG3 65 aa11.55□□□□□ -0.56
RAPGEF3-208ENST00000476259 ZNF25P17030 456 aaPredicted RBP11.55□□□□□ -0.56
RAPGEF3-208ENST00000476259 POLR2KP53803 58 aaKnown RBP11.55□□□□□ -0.56
RAPGEF3-208ENST00000476259 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
RAPGEF3-208ENST00000476259 SMIM27A0A1W2PRY6 76 aa11.54□□□□□ -0.56
RAPGEF3-208ENST00000476259 ESDP10768 282 aa11.54□□□□□ -0.56
RAPGEF3-208ENST00000476259 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
RAPGEF3-208ENST00000476259 CNBPP62633 177 aaKnown RBP11.53□□□□□ -0.56
RAPGEF3-208ENST00000476259 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
RAPGEF3-208ENST00000476259 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
RAPGEF3-208ENST00000476259 AP5S1Q9NUS5 200 aa11.53□□□□□ -0.56
RAPGEF3-208ENST00000476259 PPP1R17O96001 155 aa11.52□□□□□ -0.57
RAPGEF3-208ENST00000476259 OR5A1Q8NGJ0 315 aa11.52□□□□□ -0.57
RAPGEF3-208ENST00000476259 CAMPP49913 170 aa11.51□□□□□ -0.57
RAPGEF3-208ENST00000476259 FAM104BQ5XKR9 115 aa11.51□□□□□ -0.57
RAPGEF3-208ENST00000476259 C15orf56Q8N910 161 aa11.51□□□□□ -0.57
RAPGEF3-208ENST00000476259 NRACQ8N912 160 aa11.51□□□□□ -0.57
RAPGEF3-208ENST00000476259 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 VCYO14598 125 aa11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 SUMO2P61956 95 aaKnown RBP11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
RAPGEF3-208ENST00000476259 A0A1B0GW15 77 aa11.49□□□□□ -0.57
RAPGEF3-208ENST00000476259 SLPIP03973 132 aa11.49□□□□□ -0.57
RAPGEF3-208ENST00000476259 FCER1GP30273 86 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms