RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 RPL39P62891 51 aaKnown RBP13.82□□□□□ -0.2
SYF2-204ENST00000476231 SAMD5Q5TGI4 173 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 RNASE8Q8TDE3 154 aaKnown RBP13.82□□□□□ -0.2
SYF2-204ENST00000476231 RAB37Q96AX2 223 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 WFDC10AQ9H1F0 79 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 C11orf86A6NJI1 115 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 C20orf203Q8NBC4 194 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 HIST1H4GQ99525 98 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 SPXQ9BT56 116 aa13.82□□□□□ -0.2
SYF2-204ENST00000476231 A0A1B0GWB2 263 aa13.81□□□□□ -0.2
SYF2-204ENST00000476231 NFE4Q86UQ8 179 aa13.81□□□□□ -0.2
SYF2-204ENST00000476231 C11orf72Q8NBR9 251 aa13.81□□□□□ -0.2
SYF2-204ENST00000476231 PRM2P04554 102 aa13.8□□□□□ -0.2
SYF2-204ENST00000476231 C1QTNF4Q9BXJ3 329 aa13.8□□□□□ -0.2
SYF2-204ENST00000476231 NIPBLQ6KC79 2804 aaeCLIP13.8□□□□□ -0.2
SYF2-204ENST00000476231 NHP2Q9NX24 153 aaKnown RBP13.8□□□□□ -0.2
SYF2-204ENST00000476231 P0DMU3 169 aa13.79□□□□□ -0.2
SYF2-204ENST00000476231 FAM231AP0DMU4 169 aa13.79□□□□□ -0.2
SYF2-204ENST00000476231 FAM231CP0DMU5 169 aa13.79□□□□□ -0.2
SYF2-204ENST00000476231 CRYBA4P53673 196 aa13.79□□□□□ -0.2
SYF2-204ENST00000476231 SPATA3Q8NHX4 192 aa13.79□□□□□ -0.2
SYF2-204ENST00000476231 SPCS1Q9Y6A9 102 aa13.79□□□□□ -0.2
SYF2-204ENST00000476231 GIG44P09565 113 aaPredicted RBP13.78□□□□□ -0.2
SYF2-204ENST00000476231 PYGO1Q9Y3Y4 419 aa13.78□□□□□ -0.2
SYF2-204ENST00000476231 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
SYF2-204ENST00000476231 RPL35AP18077 110 aaKnown RBP13.78□□□□□ -0.2
SYF2-204ENST00000476231 RBX1P62877 108 aa13.78□□□□□ -0.2
SYF2-204ENST00000476231 C12orf74Q32Q52 190 aa13.78□□□□□ -0.2
SYF2-204ENST00000476231 IGHV3OR16-12A0A075B7B8 117 aa13.77□□□□□ -0.21
SYF2-204ENST00000476231 CYSRT1A8MQ03 144 aa13.77□□□□□ -0.21
SYF2-204ENST00000476231 RHODO00212 210 aa13.77□□□□□ -0.21
SYF2-204ENST00000476231 OCIAD2Q56VL3 154 aa13.76□□□□□ -0.21
SYF2-204ENST00000476231 WFDC9Q8NEX5 89 aa13.76□□□□□ -0.21
SYF2-204ENST00000476231 AZU1P20160 251 aa13.76□□□□□ -0.21
SYF2-204ENST00000476231 KRTAP24-1Q3LI83 254 aa13.76□□□□□ -0.21
SYF2-204ENST00000476231 IGLL5B9A064 214 aa13.75□□□□□ -0.21
SYF2-204ENST00000476231 IL17DQ8TAD2 202 aa13.75□□□□□ -0.21
SYF2-204ENST00000476231 DNAJC30Q96LL9 226 aa13.75□□□□□ -0.21
SYF2-204ENST00000476231 TMEM238LA0A1B0GVL6 79 aa13.74□□□□□ -0.21
SYF2-204ENST00000476231 A6NJY4 79 aa13.74□□□□□ -0.21
SYF2-204ENST00000476231 ZNRF2Q8NHG8 242 aa13.74□□□□□ -0.21
SYF2-204ENST00000476231 NAA38Q9BRA0 125 aaKnown RBP13.74□□□□□ -0.21
SYF2-204ENST00000476231 BAHCC1Q9P281 2608 aa13.74□□□□□ -0.21
SYF2-204ENST00000476231 CSNK1G2-AS1Q8NCQ2 148 aa13.74□□□□□ -0.21
SYF2-204ENST00000476231 TMEM263Q8WUH6 116 aaKnown RBP13.74□□□□□ -0.21
SYF2-204ENST00000476231 SPANXB1Q9NS25 103 aaPredicted RBP13.74□□□□□ -0.21
SYF2-204ENST00000476231 K7ERJ3 54 aa13.73□□□□□ -0.21
SYF2-204ENST00000476231 TNFRSF18Q9Y5U5 241 aa13.73□□□□□ -0.21
SYF2-204ENST00000476231 TENM1Q9UKZ4 2725 aa13.73□□□□□ -0.21
SYF2-204ENST00000476231 K7ERU9 68 aa13.72□□□□□ -0.21
SYF2-204ENST00000476231 CFAP126Q5VTH2 177 aa13.72□□□□□ -0.21
SYF2-204ENST00000476231 SCGB1D4Q6XE38 83 aa13.72□□□□□ -0.21
SYF2-204ENST00000476231 IGLV4-3A0A075B6K6 122 aa13.72□□□□□ -0.21
SYF2-204ENST00000476231 TMEM170BQ5T4T1 132 aa13.72□□□□□ -0.21
SYF2-204ENST00000476231 MRPL16Q9NX20 251 aaKnown RBP13.72□□□□□ -0.21
SYF2-204ENST00000476231 TEP1Q99973 2627 aaKnown RBP13.71□□□□□ -0.21
SYF2-204ENST00000476231 VCX2Q9H322 139 aa13.71□□□□□ -0.21
SYF2-204ENST00000476231 A0A0J9YY99 117 aa13.71□□□□□ -0.22
SYF2-204ENST00000476231 RS1O15537 224 aa13.71□□□□□ -0.22
SYF2-204ENST00000476231 WIPF1O43516 503 aa13.71□□□□□ -0.22
SYF2-204ENST00000476231 IGHV3-53P01767 116 aa13.71□□□□□ -0.22
SYF2-204ENST00000476231 ZNF479Q96JC4 524 aa13.71□□□□□ -0.22
SYF2-204ENST00000476231 AMELXQ99217 191 aa13.71□□□□□ -0.22
SYF2-204ENST00000476231 TMEM223A0PJW6 202 aa13.7□□□□□ -0.22
SYF2-204ENST00000476231 LEPROTO15243 131 aa13.7□□□□□ -0.22
SYF2-204ENST00000476231 RRN3P1Q2M238 152 aa13.7□□□□□ -0.22
SYF2-204ENST00000476231 DEFB104AQ8WTQ1 72 aa13.7□□□□□ -0.22
SYF2-204ENST00000476231 PLEKHB2Q96CS7 222 aa13.7□□□□□ -0.22
SYF2-204ENST00000476231 C16orf74Q96GX8 76 aa13.7□□□□□ -0.22
SYF2-204ENST00000476231 EMP1P54849 157 aa13.69□□□□□ -0.22
SYF2-204ENST00000476231 J3QQQ9 107 aa13.69□□□□□ -0.22
SYF2-204ENST00000476231 UBE2D1P51668 147 aa13.69□□□□□ -0.22
SYF2-204ENST00000476231 SRSF9Q13242 221 aaKnown RBP eCLIP13.69□□□□□ -0.22
SYF2-204ENST00000476231 SLC25A29Q8N8R3 303 aa13.69□□□□□ -0.22
SYF2-204ENST00000476231 SPANXA1Q9NS26 97 aa13.68□□□□□ -0.22
SYF2-204ENST00000476231 IGHV3-73A0A0B4J1V6 119 aa13.67□□□□□ -0.22
SYF2-204ENST00000476231 LGALS3P17931 250 aaKnown RBP13.67□□□□□ -0.22
SYF2-204ENST00000476231 DAZ2Q13117 558 aaKnown RBP13.67□□□□□ -0.22
SYF2-204ENST00000476231 VWFP04275 2813 aa13.67□□□□□ -0.22
SYF2-204ENST00000476231 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
SYF2-204ENST00000476231 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
SYF2-204ENST00000476231 OPRPNQ99935 248 aaPredicted RBP13.67□□□□□ -0.22
SYF2-204ENST00000476231 JMJD1CQ15652 2540 aa13.67□□□□□ -0.22
SYF2-204ENST00000476231 ATRQ13535 2644 aa13.67□□□□□ -0.22
SYF2-204ENST00000476231 NACAE9PAV3 2078 aa13.66□□□□□ -0.22
SYF2-204ENST00000476231 MRPS36P82909 103 aaKnown RBP13.66□□□□□ -0.22
SYF2-204ENST00000476231 TSPEAR-AS2P59090 65 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 C3orf56Q8N813 242 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 SHISA2Q6UWI4 295 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 Q6ZSN1 163 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 PRIMA1Q86XR5 153 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 FAM104AQ969W3 186 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 CHCHD7Q9BUK0 85 aa13.65□□□□□ -0.22
SYF2-204ENST00000476231 PLAC8L1A1L4L8 177 aa13.64□□□□□ -0.23
SYF2-204ENST00000476231 F8W1H4 67 aa13.64□□□□□ -0.23
SYF2-204ENST00000476231 NOP10Q9NPE3 64 aaKnown RBP13.63□□□□□ -0.23
SYF2-204ENST00000476231 A0A0J9YXV3 536 aa13.63□□□□□ -0.23
SYF2-204ENST00000476231 IGHV3-30P01768 117 aa13.63□□□□□ -0.23
SYF2-204ENST00000476231 IGHV3-30-5P0DP03 117 aa13.63□□□□□ -0.23
SYF2-204ENST00000476231 Q6ZTI0 123 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms