RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 DEFA1P59665 94 aa9.79□□□□□ -0.84
ITGB1-211ENST00000475184 SCO2A0A1W2PP80 73 aa9.78□□□□□ -0.84
ITGB1-211ENST00000475184 PAGE4O60829 102 aa9.78□□□□□ -0.84
ITGB1-211ENST00000475184 COTL1Q14019 142 aa9.78□□□□□ -0.84
ITGB1-211ENST00000475184 Q5BKY6 102 aa9.78□□□□□ -0.84
ITGB1-211ENST00000475184 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
ITGB1-211ENST00000475184 ALG5Q9Y673 324 aa9.78□□□□□ -0.84
ITGB1-211ENST00000475184 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
ITGB1-211ENST00000475184 FOXI1Q12951 378 aa9.76□□□□□ -0.85
ITGB1-211ENST00000475184 FER1L6-AS1Q8NA97 138 aa9.76□□□□□ -0.85
ITGB1-211ENST00000475184 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
ITGB1-211ENST00000475184 MED28Q9H204 178 aa9.76□□□□□ -0.85
ITGB1-211ENST00000475184 IGLC6P0CF74 106 aa9.75□□□□□ -0.85
ITGB1-211ENST00000475184 ZNF664Q8N3J9 261 aa9.75□□□□□ -0.85
ITGB1-211ENST00000475184 FXYD6-FXYD2A0A087WZ82 144 aa9.74□□□□□ -0.85
ITGB1-211ENST00000475184 CACNG7P62955 275 aa9.74□□□□□ -0.85
ITGB1-211ENST00000475184 AMMECR1LQ6DCA0 310 aa9.74□□□□□ -0.85
ITGB1-211ENST00000475184 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
ITGB1-211ENST00000475184 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
ITGB1-211ENST00000475184 PFDN1O60925 122 aa9.73□□□□□ -0.85
ITGB1-211ENST00000475184 TRGC1P0CF51 173 aa9.72□□□□□ -0.85
ITGB1-211ENST00000475184 XCL1P47992 114 aa9.72□□□□□ -0.85
ITGB1-211ENST00000475184 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
ITGB1-211ENST00000475184 RNASEKQ6P5S7 137 aaKnown RBP9.72□□□□□ -0.85
ITGB1-211ENST00000475184 TRAV26-2A0A0B4J265 109 aa9.71□□□□□ -0.86
ITGB1-211ENST00000475184 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
ITGB1-211ENST00000475184 A0A0U1RQV1 116 aa9.71□□□□□ -0.86
ITGB1-211ENST00000475184 GIPP09681 153 aaPredicted RBP9.71□□□□□ -0.86
ITGB1-211ENST00000475184 NTF3P20783 257 aa9.71□□□□□ -0.86
ITGB1-211ENST00000475184 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
ITGB1-211ENST00000475184 TMUB2Q71RG4 321 aa9.71□□□□□ -0.86
ITGB1-211ENST00000475184 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.86
ITGB1-211ENST00000475184 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.7□□□□□ -0.86
ITGB1-211ENST00000475184 IGKV2-29A2NJV5 120 aaPredicted RBP9.7□□□□□ -0.86
ITGB1-211ENST00000475184 MT-ND6P03923 174 aa9.7□□□□□ -0.86
ITGB1-211ENST00000475184 RPL35P42766 123 aaKnown RBP9.7□□□□□ -0.86
ITGB1-211ENST00000475184 SYCNQ0VAF6 134 aa9.7□□□□□ -0.86
ITGB1-211ENST00000475184 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
ITGB1-211ENST00000475184 SFT2D1Q8WV19 159 aa9.7□□□□□ -0.86
ITGB1-211ENST00000475184 A0A1B0GV50 99 aa9.69□□□□□ -0.86
ITGB1-211ENST00000475184 F2Z2F3 143 aa9.69□□□□□ -0.86
ITGB1-211ENST00000475184 FGF6P10767 208 aa9.69□□□□□ -0.86
ITGB1-211ENST00000475184 Q6ZNX1 250 aa9.69□□□□□ -0.86
ITGB1-211ENST00000475184 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 H7C423 109 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 CCL25O15444 150 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 NCR2O95944 276 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 OR5A1Q8NGJ0 315 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 CYTL1Q9NRR1 136 aa9.68□□□□□ -0.86
ITGB1-211ENST00000475184 LOC107984640A0A0U1RRK4 108 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 APCSP02743 223 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 LYZL1Q6UWQ5 148 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 FAM213BQ8TBF2 198 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 MBD3L1Q8WWY6 194 aa9.67□□□□□ -0.86
ITGB1-211ENST00000475184 LINC00959A0A1B0GUT2 108 aa9.66□□□□□ -0.86
ITGB1-211ENST00000475184 XKRY2A2RUG3 117 aa9.66□□□□□ -0.86
ITGB1-211ENST00000475184 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
ITGB1-211ENST00000475184 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
ITGB1-211ENST00000475184 CAMPP49913 170 aa9.66□□□□□ -0.86
ITGB1-211ENST00000475184 CENPWQ5EE01 88 aa9.66□□□□□ -0.86
ITGB1-211ENST00000475184 KCNRGQ8N5I3 272 aa9.66□□□□□ -0.86
ITGB1-211ENST00000475184 KRTAP9-6A0A140TA67 174 aa9.65□□□□□ -0.86
ITGB1-211ENST00000475184 IFNA1P01562 189 aa9.65□□□□□ -0.86
ITGB1-211ENST00000475184 DIRC1Q969H9 104 aa9.65□□□□□ -0.86
ITGB1-211ENST00000475184 FAT4Q6V0I7 4981 aa9.65□□□□□ -0.87
ITGB1-211ENST00000475184 BCL2P10415 239 aa9.64□□□□□ -0.87
ITGB1-211ENST00000475184 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
ITGB1-211ENST00000475184 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
ITGB1-211ENST00000475184 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
ITGB1-211ENST00000475184 TMEM101Q96IK0 257 aa9.64□□□□□ -0.87
ITGB1-211ENST00000475184 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
ITGB1-211ENST00000475184 ARPC5O15511 151 aa9.63□□□□□ -0.87
ITGB1-211ENST00000475184 CTRLP40313 264 aa9.63□□□□□ -0.87
ITGB1-211ENST00000475184 TWIST1Q15672 202 aa9.63□□□□□ -0.87
ITGB1-211ENST00000475184 PRR4Q16378 134 aa9.63□□□□□ -0.87
ITGB1-211ENST00000475184 CD164L2Q6UWJ8 174 aa9.63□□□□□ -0.87
ITGB1-211ENST00000475184 C11orf52Q96A22 123 aa9.63□□□□□ -0.87
ITGB1-211ENST00000475184 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
ITGB1-211ENST00000475184 UMAD1C9J7I0 102 aa9.62□□□□□ -0.87
ITGB1-211ENST00000475184 G3V3Q6 166 aa9.62□□□□□ -0.87
ITGB1-211ENST00000475184 SS18Q15532 418 aa9.62□□□□□ -0.87
ITGB1-211ENST00000475184 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
ITGB1-211ENST00000475184 C9orf62Q8N4C0 152 aa9.62□□□□□ -0.87
ITGB1-211ENST00000475184 SDHAF1A6NFY7 115 aa9.61□□□□□ -0.87
ITGB1-211ENST00000475184 APOMO95445 188 aa9.61□□□□□ -0.87
ITGB1-211ENST00000475184 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
ITGB1-211ENST00000475184 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
ITGB1-211ENST00000475184 SMIM12Q96EX1 92 aa9.61□□□□□ -0.87
ITGB1-211ENST00000475184 CNFNQ9BYD5 112 aa9.61□□□□□ -0.87
ITGB1-211ENST00000475184 IGLV1-50A0A075B6I6 118 aa9.6□□□□□ -0.87
ITGB1-211ENST00000475184 H0Y9J4 135 aa9.6□□□□□ -0.87
ITGB1-211ENST00000475184 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
ITGB1-211ENST00000475184 EIF5AP63241 154 aaKnown RBP9.6□□□□□ -0.87
ITGB1-211ENST00000475184 RPL18AQ02543 176 aaKnown RBP9.6□□□□□ -0.87
ITGB1-211ENST00000475184 EIF5AL1Q6IS14 154 aaKnown RBP9.6□□□□□ -0.87
ITGB1-211ENST00000475184 RAB19A4D1S5 217 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms