RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 C18orf32Q8TCD1 76 aa6.62□□□□□ -1.35
DDX39B-217ENST00000474961 C20orf78Q9BR46 151 aa6.62□□□□□ -1.35
DDX39B-217ENST00000474961 TMEM70Q9BUB7 260 aa6.62□□□□□ -1.35
DDX39B-217ENST00000474961 MAP1LC3AQ9H492 121 aa6.62□□□□□ -1.35
DDX39B-217ENST00000474961 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
DDX39B-217ENST00000474961 A0A096LPF7 62 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 IGLL5B9A064 214 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 NUDT3O95989 172 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 RPL32P62910 135 aaKnown RBP6.61□□□□□ -1.35
DDX39B-217ENST00000474961 IQCJQ1A5X6 159 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 WWC2-AS2Q96NR7 200 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
DDX39B-217ENST00000474961 CHTOPQ9Y3Y2 248 aaKnown RBP6.61□□□□□ -1.35
DDX39B-217ENST00000474961 IGLV2-18A0A075B6J9 118 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 IGHV3-38A0A0C4DH36 116 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 NUPR2A6NF83 97 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 VCYO14598 125 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BKO60814 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BJP06899 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 PMCHP20382 165 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BOP23527 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BBP33778 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 IFI27P40305 119 aaPredicted RBP6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BDP58876 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BCP62807 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST2H2BEQ16778 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.6□□□□□ -1.35
DDX39B-217ENST00000474961 C15orf53Q8NAA6 179 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 ATP6V0E2Q8NHE4 81 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 DEFB104AQ8WTQ1 72 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BHQ93079 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BNQ99877 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 HIST1H2BMQ99879 126 aa6.6□□□□□ -1.35
DDX39B-217ENST00000474961 TRBV27A0A0K0K1C4 114 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 I3L3M4 83 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 Q0VG73 95 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 ZFAND6Q6FIF0 208 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.35
DDX39B-217ENST00000474961 Q8N8P6 123 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 PRSS3P2Q8NHM4 247 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 MUC7Q8TAX7 377 aa6.59□□□□□ -1.35
DDX39B-217ENST00000474961 DAZ3Q9NR90 486 aaKnown RBP6.59□□□□□ -1.35
DDX39B-217ENST00000474961 KLK5Q9Y337 293 aaPredicted RBP6.59□□□□□ -1.35
DDX39B-217ENST00000474961 DNAH7Q8WXX0 4024 aa6.59□□□□□ -1.36
DDX39B-217ENST00000474961 TSHBP01222 138 aa6.58□□□□□ -1.36
DDX39B-217ENST00000474961 RAB5BP61020 215 aa6.58□□□□□ -1.36
DDX39B-217ENST00000474961 FA2HQ7L5A8 372 aa6.58□□□□□ -1.36
DDX39B-217ENST00000474961 NIT1Q86X76 327 aa6.58□□□□□ -1.36
DDX39B-217ENST00000474961 BAGE3Q86Y29 109 aa6.58□□□□□ -1.36
DDX39B-217ENST00000474961 URB1-AS1Q96HZ7 61 aa6.58□□□□□ -1.36
DDX39B-217ENST00000474961 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
DDX39B-217ENST00000474961 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
DDX39B-217ENST00000474961 TCAPO15273 167 aa6.57□□□□□ -1.36
DDX39B-217ENST00000474961 NTM-AS1Q6ZSK4 140 aa6.57□□□□□ -1.36
DDX39B-217ENST00000474961 KIR2DL4Q99706 377 aa6.57□□□□□ -1.36
DDX39B-217ENST00000474961 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
DDX39B-217ENST00000474961 APLNQ9ULZ1 77 aa6.57□□□□□ -1.36
DDX39B-217ENST00000474961 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
DDX39B-217ENST00000474961 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 LINC00614P0C842 121 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 FCER1GP30273 86 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 NDUFA6P56556 154 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 ESRGQ1W209 222 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 RNASEKQ6P5S7 137 aaKnown RBP6.56□□□□□ -1.36
DDX39B-217ENST00000474961 LYPD5Q6UWN5 251 aa6.56□□□□□ -1.36
DDX39B-217ENST00000474961 TRBV6-8A0A0A6YYG3 113 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 IGHV1-24A0A0C4DH33 117 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 K7EMI3 77 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 NUPR1O60356 82 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 SERF1AO75920 110 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 AMTP48728 403 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 TCTAP57738 103 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 TIRAPP58753 221 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 LAGE3Q14657 143 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 C21orf62-AS1Q17RA5 79 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
DDX39B-217ENST00000474961 KMT2CQ8NEZ4 4911 aaKnown RBP6.54□□□□□ -1.36
DDX39B-217ENST00000474961 TRBV25-1A0A075B6N4 114 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 HSBP1L1C9JCN9 74 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 ESDP10768 282 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 ORMDL2Q53FV1 153 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 COA6Q5JTJ3 125 aaKnown RBP6.54□□□□□ -1.36
DDX39B-217ENST00000474961 LELP1Q5T871 98 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
DDX39B-217ENST00000474961 TMEM243Q9BU79 118 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
DDX39B-217ENST00000474961 C3orf84H3BNL1 204 aa6.53□□□□□ -1.36
DDX39B-217ENST00000474961 CSMD3Q7Z407 3707 aa6.52□□□□□ -1.37
DDX39B-217ENST00000474961 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.52□□□□□ -1.37
DDX39B-217ENST00000474961 IGKV2-29A2NJV5 120 aaPredicted RBP6.52□□□□□ -1.37
DDX39B-217ENST00000474961 HSBP1O75506 76 aa6.52□□□□□ -1.37
DDX39B-217ENST00000474961 CCL18P55774 89 aa6.52□□□□□ -1.37
DDX39B-217ENST00000474961 GAGE6Q13070 117 aa6.52□□□□□ -1.37
DDX39B-217ENST00000474961 PMCHL1Q16048 86 aa6.52□□□□□ -1.37
DDX39B-217ENST00000474961 CASC10Q5T4H9 136 aa6.52□□□□□ -1.37
DDX39B-217ENST00000474961 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms