RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 C1orf43Q9BWL3 253 aa10.58□□□□□ -0.72
ITGB1-210ENST00000474568 GFRA4Q9GZZ7 299 aa10.58□□□□□ -0.72
ITGB1-210ENST00000474568 COX11Q9Y6N1 276 aa10.58□□□□□ -0.72
ITGB1-210ENST00000474568 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
ITGB1-210ENST00000474568 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
ITGB1-210ENST00000474568 AMTP48728 403 aa10.57□□□□□ -0.72
ITGB1-210ENST00000474568 HAMPP81172 84 aa10.57□□□□□ -0.72
ITGB1-210ENST00000474568 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
ITGB1-210ENST00000474568 NUP35Q8NFH5 326 aa10.57□□□□□ -0.72
ITGB1-210ENST00000474568 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
ITGB1-210ENST00000474568 UBE2L6O14933 153 aa10.56□□□□□ -0.72
ITGB1-210ENST00000474568 FAM231BA6NCW3 169 aa10.55□□□□□ -0.72
ITGB1-210ENST00000474568 AMN1Q8IY45 258 aa10.55□□□□□ -0.72
ITGB1-210ENST00000474568 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
ITGB1-210ENST00000474568 SMDT1Q9H4I9 107 aa10.55□□□□□ -0.72
ITGB1-210ENST00000474568 DNAH8Q96JB1 4490 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 SMKR1H3BMG3 65 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 HLA-DQA1P01909 254 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 XGP55808 180 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 RAB14P61106 215 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 RIGQ13278 110 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 FRZBQ92765 325 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 TMEM191AQ9H0A3 160 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 NAT8BQ9UHF3 227 aa10.54□□□□□ -0.72
ITGB1-210ENST00000474568 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
ITGB1-210ENST00000474568 NCR2O95944 276 aa10.53□□□□□ -0.72
ITGB1-210ENST00000474568 RAB4AP20338 218 aa10.53□□□□□ -0.72
ITGB1-210ENST00000474568 MIAQ16674 131 aa10.53□□□□□ -0.72
ITGB1-210ENST00000474568 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-210ENST00000474568 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
ITGB1-210ENST00000474568 PMCHP20382 165 aa10.52□□□□□ -0.73
ITGB1-210ENST00000474568 REG3AQ06141 175 aa10.52□□□□□ -0.73
ITGB1-210ENST00000474568 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
ITGB1-210ENST00000474568 Q8N1X5 172 aa10.52□□□□□ -0.73
ITGB1-210ENST00000474568 PRR34Q9NV39 138 aa10.52□□□□□ -0.73
ITGB1-210ENST00000474568 SMIM27A0A1W2PRY6 76 aa10.51□□□□□ -0.73
ITGB1-210ENST00000474568 APCSP02743 223 aa10.51□□□□□ -0.73
ITGB1-210ENST00000474568 RPS10P46783 165 aaKnown RBP10.51□□□□□ -0.73
ITGB1-210ENST00000474568 CAMPP49913 170 aa10.51□□□□□ -0.73
ITGB1-210ENST00000474568 ST20Q9HBF5 79 aa10.51□□□□□ -0.73
ITGB1-210ENST00000474568 IGKV3OR2-268A0A0C4DH90 116 aa10.5□□□□□ -0.73
ITGB1-210ENST00000474568 TRBV6-5A0A0K0K1A5 114 aa10.5□□□□□ -0.73
ITGB1-210ENST00000474568 TMEM242Q9NWH2 141 aa10.5□□□□□ -0.73
ITGB1-210ENST00000474568 FAM30AQ9NZY2 134 aa10.5□□□□□ -0.73
ITGB1-210ENST00000474568 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
ITGB1-210ENST00000474568 USP17L23D6RBM5 183 aa10.49□□□□□ -0.73
ITGB1-210ENST00000474568 I3L3M4 83 aa10.49□□□□□ -0.73
ITGB1-210ENST00000474568 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
ITGB1-210ENST00000474568 MRPL54Q6P161 138 aaKnown RBP10.49□□□□□ -0.73
ITGB1-210ENST00000474568 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
ITGB1-210ENST00000474568 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
ITGB1-210ENST00000474568 FAT1Q14517 4588 aa10.49□□□□□ -0.73
ITGB1-210ENST00000474568 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
ITGB1-210ENST00000474568 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
ITGB1-210ENST00000474568 TMEM70Q9BUB7 260 aa10.48□□□□□ -0.73
ITGB1-210ENST00000474568 TSHBP01222 138 aa10.47□□□□□ -0.73
ITGB1-210ENST00000474568 FGF6P10767 208 aa10.46□□□□□ -0.73
ITGB1-210ENST00000474568 MRPL51Q4U2R6 128 aaKnown RBP10.46□□□□□ -0.73
ITGB1-210ENST00000474568 C14orf177Q52M58 125 aa10.46□□□□□ -0.73
ITGB1-210ENST00000474568 CLLU1Q5K131 121 aa10.46□□□□□ -0.73
ITGB1-210ENST00000474568 FAM104BQ5XKR9 115 aa10.46□□□□□ -0.73
ITGB1-210ENST00000474568 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
ITGB1-210ENST00000474568 IFITM2Q01629 132 aa10.45□□□□□ -0.74
ITGB1-210ENST00000474568 NRACQ8N912 160 aa10.45□□□□□ -0.74
ITGB1-210ENST00000474568 EPM2AB3EWF7 344 aa10.44□□□□□ -0.74
ITGB1-210ENST00000474568 PRSS1P07477 247 aa10.44□□□□□ -0.74
ITGB1-210ENST00000474568 HBBP68871 147 aa10.44□□□□□ -0.74
ITGB1-210ENST00000474568 TRAV8-4A0A0B4J246 113 aa10.43□□□□□ -0.74
ITGB1-210ENST00000474568 A0A1B0GW15 77 aa10.43□□□□□ -0.74
ITGB1-210ENST00000474568 FCER1GP30273 86 aa10.43□□□□□ -0.74
ITGB1-210ENST00000474568 CKS2P33552 79 aa10.43□□□□□ -0.74
ITGB1-210ENST00000474568 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 A0A1B0GXF2 115 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 GAGE12HA6NDE8 117 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 H7C423 109 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 VCYO14598 125 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 PPP1R2P9O14990 202 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 ESDP10768 282 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 SUMO2P61956 95 aaKnown RBP10.42□□□□□ -0.74
ITGB1-210ENST00000474568 TMEM101Q96IK0 257 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 BTF3L4Q96K17 158 aa10.42□□□□□ -0.74
ITGB1-210ENST00000474568 D6R8Y8 96 aa10.41□□□□□ -0.74
ITGB1-210ENST00000474568 S100A8P05109 93 aa10.41□□□□□ -0.74
ITGB1-210ENST00000474568 Q5VSD8 79 aa10.41□□□□□ -0.74
ITGB1-210ENST00000474568 OR5A1Q8NGJ0 315 aa10.41□□□□□ -0.74
ITGB1-210ENST00000474568 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
ITGB1-210ENST00000474568 F8W036 122 aa10.4□□□□□ -0.74
ITGB1-210ENST00000474568 PPP1R17O96001 155 aa10.4□□□□□ -0.74
ITGB1-210ENST00000474568 MT-ND4LP03901 98 aa10.4□□□□□ -0.74
ITGB1-210ENST00000474568 PNRC1Q12796 327 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-210ENST00000474568 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
ITGB1-210ENST00000474568 ZNF25P17030 456 aaPredicted RBP10.39□□□□□ -0.75
ITGB1-210ENST00000474568 Q6ZSA8 131 aa10.39□□□□□ -0.75
ITGB1-210ENST00000474568 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
ITGB1-210ENST00000474568 KIR2DL4Q99706 377 aa10.39□□□□□ -0.75
ITGB1-210ENST00000474568 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
ITGB1-210ENST00000474568 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms