RNA–Protein interactions for RNA: ENST00000474391.1

COL4A1-203, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 2

Gene COL4A1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-203ENST00000474391 Q6ZSA8 131 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 TSKUQ8WUA8 353 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 SEC11CQ9BY50 192 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 GFRA4Q9GZZ7 299 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 OSTCQ9NRP0 149 aa6.91□□□□□ -1.3
COL4A1-203ENST00000474391 CARHSP1Q9Y2V2 147 aaKnown RBP6.91□□□□□ -1.3
COL4A1-203ENST00000474391 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
COL4A1-203ENST00000474391 TRAV26-2A0A0B4J265 109 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 EPM2AB3EWF7 344 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
COL4A1-203ENST00000474391 FAM74A3Q4VXF1 159 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 KRTAP26-1Q6PEX3 210 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 LINC00269Q8N2A0 174 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 C20orf203Q8NBC4 194 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
COL4A1-203ENST00000474391 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.31
COL4A1-203ENST00000474391 HIGD1CA8MV81 97 aa6.89□□□□□ -1.31
COL4A1-203ENST00000474391 C9JQL5 133 aa6.89□□□□□ -1.31
COL4A1-203ENST00000474391 COTL1Q14019 142 aa6.89□□□□□ -1.31
COL4A1-203ENST00000474391 FAT1Q14517 4588 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 A0A1B0GUT8 65 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 AMTP48728 403 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 RPL23P62829 140 aaKnown RBP6.88□□□□□ -1.31
COL4A1-203ENST00000474391 REG3AQ06141 175 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 ISOC2Q96AB3 205 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 BORCS7Q96B45 105 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 RPL39LQ96EH5 51 aaKnown RBP6.88□□□□□ -1.31
COL4A1-203ENST00000474391 TMEM191AQ9H0A3 160 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 V9GYV3 84 aa6.88□□□□□ -1.31
COL4A1-203ENST00000474391 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 NCR2O95944 276 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
COL4A1-203ENST00000474391 ADCYAP1P18509 176 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 HAMPP81172 84 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 Q5VSD8 79 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 DEFB104AQ8WTQ1 72 aa6.87□□□□□ -1.31
COL4A1-203ENST00000474391 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 TRAV8-4A0A0B4J246 113 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 HLA-DQA1P01909 254 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 RNF185Q96GF1 192 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 NAT8Q9UHE5 227 aa6.86□□□□□ -1.31
COL4A1-203ENST00000474391 F8W036 122 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 H7C423 109 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 UBE2L6O14933 153 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 GAS8-AS1O95177 125 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 RAB4AP20338 218 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 PNRC1Q12796 327 aaPredicted RBP6.85□□□□□ -1.31
COL4A1-203ENST00000474391 SVBPQ8N300 66 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 NUP35Q8NFH5 326 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 NAT8BQ9UHF3 227 aa6.85□□□□□ -1.31
COL4A1-203ENST00000474391 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 SMIM27A0A1W2PRY6 76 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 I3L3M4 83 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 PRSS1P07477 247 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
COL4A1-203ENST00000474391 RIGQ13278 110 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 ADIRFQ15847 76 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 DGAT2L7PQ6IED9 249 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 MRAP2Q96G30 205 aa6.84□□□□□ -1.31
COL4A1-203ENST00000474391 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 TRBV27A0A0K0K1C4 114 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 SNAPINO95295 136 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 APCSP02743 223 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 INAFM2P0DMQ5 153 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 ESDP10768 282 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 RPS10P46783 165 aaKnown RBP6.83□□□□□ -1.32
COL4A1-203ENST00000474391 AMN1Q8IY45 258 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 CLRN3Q8NCR9 226 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
COL4A1-203ENST00000474391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
COL4A1-203ENST00000474391 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
COL4A1-203ENST00000474391 TSHBP01222 138 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 FGF6P10767 208 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 PMCHP20382 165 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 RHEBQ15382 184 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 SCXQ7RTU7 201 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 CHAC1Q9BUX1 264 aa6.82□□□□□ -1.32
COL4A1-203ENST00000474391 A0A1B0GW15 77 aa6.81□□□□□ -1.32
COL4A1-203ENST00000474391 PPP1R17O96001 155 aa6.81□□□□□ -1.32
COL4A1-203ENST00000474391 APOC3P02656 99 aa6.81□□□□□ -1.32
COL4A1-203ENST00000474391 ZNF25P17030 456 aaPredicted RBP6.81□□□□□ -1.32
COL4A1-203ENST00000474391 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
COL4A1-203ENST00000474391 AMMECR1LQ6DCA0 310 aa6.81□□□□□ -1.32
COL4A1-203ENST00000474391 NRACQ8N912 160 aa6.81□□□□□ -1.32
COL4A1-203ENST00000474391 FAM104BQ5XKR9 115 aa6.8□□□□□ -1.32
COL4A1-203ENST00000474391 MRPL52Q86TS9 123 aaKnown RBP6.8□□□□□ -1.32
COL4A1-203ENST00000474391 CIRBP-AS1Q8TBR5 109 aa6.8□□□□□ -1.32
COL4A1-203ENST00000474391 TMEM242Q9NWH2 141 aa6.8□□□□□ -1.32
COL4A1-203ENST00000474391 SMKR1H3BMG3 65 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms