RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LOC100131303A0A0U1RQF7 123 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 H3BNG1 76 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 LEPROTL1O95214 131 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 ESDP10768 282 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 FABP4P15090 132 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 PMCHL1Q16048 86 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 HIST3H2BBQ8N257 126 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 FAM19A2Q8N3H0 131 aa7.22□□□□□ -1.25
PRPF38A-202ENST00000474048 A0A096LPF7 62 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 AKR1D1P51857 326 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 AMMECR1LQ6DCA0 310 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 DGAT2L7PQ6IED9 249 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 KLK5Q9Y337 293 aaPredicted RBP7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 NBEAL2Q6ZNJ1 2754 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.26
PRPF38A-202ENST00000474048 IGLV2-18A0A075B6J9 118 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 NUPR2A6NF83 97 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 LINC01546A6NGU7 62 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 ATP5LO75964 103 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 TSHBP01222 138 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 PKIAP61925 76 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 PAPPA-AS1Q5QFB9 102 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 Q6ZN92 141 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 DEFB104AQ8WTQ1 72 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 TMEM101Q96IK0 257 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 PACRGQ96M98 296 aaPredicted RBP7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 CHCHD5Q9BSY4 110 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 GTSF1LQ9H1H1 148 aa7.2□□□□□ -1.26
PRPF38A-202ENST00000474048 C20orf202A1L168 122 aa7.19□□□□□ -1.26
PRPF38A-202ENST00000474048 IGLL5B9A064 214 aa7.19□□□□□ -1.26
PRPF38A-202ENST00000474048 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.19□□□□□ -1.26
PRPF38A-202ENST00000474048 J3QL48 77 aa7.19□□□□□ -1.26
PRPF38A-202ENST00000474048 URB1-AS1Q96HZ7 61 aa7.19□□□□□ -1.26
PRPF38A-202ENST00000474048 VSIG2Q96IQ7 327 aa7.19□□□□□ -1.26
PRPF38A-202ENST00000474048 TRBV6-8A0A0A6YYG3 113 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 TRAV8-6A0A0B4J262 113 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 H0Y8G0 127 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 NUPR1O60356 82 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 LINC00310P59036 64 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 KRTDAPP60985 99 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 TOMM6Q96B49 74 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 HIST1H2BLQ99880 126 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 Q9UF83 564 aa7.18□□□□□ -1.26
PRPF38A-202ENST00000474048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 TMEM262E9PQX1 116 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 H7C423 109 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 PRSS1P07477 247 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 LINC00694P0DN24 101 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 C20orf203Q8NBC4 194 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 OR10D4PQ8NGN7 298 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 IFI27L1Q96BM0 104 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 SPANXA1Q9NS26 97 aa7.17□□□□□ -1.26
PRPF38A-202ENST00000474048 A0A087WX48 190 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 CCL18P55774 89 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 LELP1Q5T871 98 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 ERASQ7Z444 233 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 UBE2DNLQ8IWF7 75 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 C2orf88Q9BSF0 95 aa7.16□□□□□ -1.26
PRPF38A-202ENST00000474048 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.26
PRPF38A-202ENST00000474048 ZNF25P17030 456 aaPredicted RBP7.15□□□□□ -1.26
PRPF38A-202ENST00000474048 RPL39P62891 51 aaKnown RBP7.15□□□□□ -1.26
PRPF38A-202ENST00000474048 CEMP1Q6PRD7 247 aaPredicted RBP7.15□□□□□ -1.26
PRPF38A-202ENST00000474048 TIMM17AQ99595 171 aa7.15□□□□□ -1.26
PRPF38A-202ENST00000474048 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 NPSP0C0P6 89 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 FGF6P10767 208 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 TCTAP57738 103 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 GAGE6Q13070 117 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 TEX43Q6ZNM6 134 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 CHCHD7Q9BUK0 85 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 VCX2Q9H322 139 aa7.14□□□□□ -1.27
PRPF38A-202ENST00000474048 A0A096LNJ9 63 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 TIRAPP58753 221 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 LYPD5Q6UWN5 251 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 PET117Q6UWS5 81 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 NTM-AS1Q6ZSK4 140 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 TIMM21Q9BVV7 248 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
PRPF38A-202ENST00000474048 DNHD1Q96M86 4753 aa7.12□□□□□ -1.27
PRPF38A-202ENST00000474048 C3orf79P0CE67 100 aa7.12□□□□□ -1.27
PRPF38A-202ENST00000474048 WWC2-AS2Q96NR7 200 aa7.12□□□□□ -1.27
PRPF38A-202ENST00000474048 UBE2D4Q9Y2X8 147 aa7.12□□□□□ -1.27
PRPF38A-202ENST00000474048 IFITM10A6NMD0 228 aa7.11□□□□□ -1.27
PRPF38A-202ENST00000474048 SYS1-DBNDD2H3BUS1 97 aa7.11□□□□□ -1.27
PRPF38A-202ENST00000474048 PMVKQ15126 192 aa7.11□□□□□ -1.27
PRPF38A-202ENST00000474048 MRPL52Q86TS9 123 aaKnown RBP7.11□□□□□ -1.27
PRPF38A-202ENST00000474048 TENM3Q9P273 2699 aa7.11□□□□□ -1.27
PRPF38A-202ENST00000474048 HSBP1L1C9JCN9 74 aa7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 CRPP02741 224 aa7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 MRPS36P82909 103 aaKnown RBP7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 ZFAND6Q6FIF0 208 aa7.1□□□□□ -1.27
PRPF38A-202ENST00000474048 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms