RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 TNFSF18Q9UNG2 199 aa9.63□□□□□ -0.87
HPS4-210ENST00000473782 IGHV1-58A0A0C4DH39 117 aa9.62□□□□□ -0.87
HPS4-210ENST00000473782 PET100P0DJ07 73 aa9.62□□□□□ -0.87
HPS4-210ENST00000473782 SMIM17P0DL12 118 aa9.62□□□□□ -0.87
HPS4-210ENST00000473782 UBE2G1P62253 170 aa9.62□□□□□ -0.87
HPS4-210ENST00000473782 AP1S3Q96PC3 154 aa9.62□□□□□ -0.87
HPS4-210ENST00000473782 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
HPS4-210ENST00000473782 NKX6-2Q9C056 277 aaPredicted RBP9.62□□□□□ -0.87
HPS4-210ENST00000473782 MGPP08493 103 aa9.61□□□□□ -0.87
HPS4-210ENST00000473782 BCL2P10415 239 aa9.61□□□□□ -0.87
HPS4-210ENST00000473782 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
HPS4-210ENST00000473782 XCL1P47992 114 aa9.6□□□□□ -0.87
HPS4-210ENST00000473782 RASL11AQ6T310 242 aa9.6□□□□□ -0.87
HPS4-210ENST00000473782 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.87
HPS4-210ENST00000473782 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
HPS4-210ENST00000473782 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
HPS4-210ENST00000473782 CTXND1A0A1B0GTU2 59 aa9.58□□□□□ -0.88
HPS4-210ENST00000473782 TSPAN13O95857 204 aa9.58□□□□□ -0.88
HPS4-210ENST00000473782 COTL1Q14019 142 aa9.58□□□□□ -0.88
HPS4-210ENST00000473782 NUP35Q8NFH5 326 aa9.58□□□□□ -0.88
HPS4-210ENST00000473782 CCDC32Q9BV29 185 aa9.58□□□□□ -0.88
HPS4-210ENST00000473782 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.57□□□□□ -0.88
HPS4-210ENST00000473782 IGKV2-29A2NJV5 120 aaPredicted RBP9.57□□□□□ -0.88
HPS4-210ENST00000473782 CCL25O15444 150 aa9.57□□□□□ -0.88
HPS4-210ENST00000473782 CAMPP49913 170 aa9.57□□□□□ -0.88
HPS4-210ENST00000473782 Q6ZNX1 250 aa9.57□□□□□ -0.88
HPS4-210ENST00000473782 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 TRAV1-1A0A0B4J248 108 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 FGF6P10767 208 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 NTF3P20783 257 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 MZT2BQ6NZ67 158 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 OR5A1Q8NGJ0 315 aa9.56□□□□□ -0.88
HPS4-210ENST00000473782 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
HPS4-210ENST00000473782 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
HPS4-210ENST00000473782 RPL13AP40429 203 aaKnown RBP9.55□□□□□ -0.88
HPS4-210ENST00000473782 AKR1C3P42330 323 aa9.55□□□□□ -0.88
HPS4-210ENST00000473782 FHITP49789 147 aa9.55□□□□□ -0.88
HPS4-210ENST00000473782 UBE2D1P51668 147 aa9.55□□□□□ -0.88
HPS4-210ENST00000473782 A0A087WZ39 114 aa9.54□□□□□ -0.88
HPS4-210ENST00000473782 APOMO95445 188 aa9.54□□□□□ -0.88
HPS4-210ENST00000473782 RNASEKQ6P5S7 137 aaKnown RBP9.54□□□□□ -0.88
HPS4-210ENST00000473782 INMT-MINDY4F8WBC2 141 aa9.53□□□□□ -0.88
HPS4-210ENST00000473782 AMMECR1LQ6DCA0 310 aa9.53□□□□□ -0.88
HPS4-210ENST00000473782 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
HPS4-210ENST00000473782 TCEAL7Q9BRU2 100 aa9.53□□□□□ -0.88
HPS4-210ENST00000473782 CARHSP1Q9Y2V2 147 aaKnown RBP9.53□□□□□ -0.88
HPS4-210ENST00000473782 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
HPS4-210ENST00000473782 EIF5AP63241 154 aaKnown RBP9.52□□□□□ -0.89
HPS4-210ENST00000473782 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
HPS4-210ENST00000473782 H7C423 109 aa9.51□□□□□ -0.89
HPS4-210ENST00000473782 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
HPS4-210ENST00000473782 CD164L2Q6UWJ8 174 aa9.51□□□□□ -0.89
HPS4-210ENST00000473782 BAGE2Q86Y30 109 aa9.51□□□□□ -0.89
HPS4-210ENST00000473782 GATD1Q8NB37 220 aa9.51□□□□□ -0.89
HPS4-210ENST00000473782 OPRPNQ99935 248 aaPredicted RBP9.51□□□□□ -0.89
HPS4-210ENST00000473782 SSNA1O43805 119 aa9.5□□□□□ -0.89
HPS4-210ENST00000473782 RPL18AQ02543 176 aaKnown RBP9.5□□□□□ -0.89
HPS4-210ENST00000473782 RPL7L1Q6DKI1 246 aaKnown RBP9.5□□□□□ -0.89
HPS4-210ENST00000473782 ENKURQ8TC29 256 aa9.5□□□□□ -0.89
HPS4-210ENST00000473782 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
HPS4-210ENST00000473782 MARVELD1Q9BSK0 173 aa9.5□□□□□ -0.89
HPS4-210ENST00000473782 TPPP3Q9BW30 176 aa9.5□□□□□ -0.89
HPS4-210ENST00000473782 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
HPS4-210ENST00000473782 IFITM3Q01628 133 aa9.49□□□□□ -0.89
HPS4-210ENST00000473782 STOML3Q8TAV4 291 aa9.49□□□□□ -0.89
HPS4-210ENST00000473782 MAP1LC3B2A6NCE7 125 aa9.48□□□□□ -0.89
HPS4-210ENST00000473782 PAGE4O60829 102 aa9.48□□□□□ -0.89
HPS4-210ENST00000473782 NCR2O95944 276 aa9.48□□□□□ -0.89
HPS4-210ENST00000473782 CAMK2N2Q96S95 79 aa9.48□□□□□ -0.89
HPS4-210ENST00000473782 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
HPS4-210ENST00000473782 BCL2L11O43521 198 aa9.47□□□□□ -0.89
HPS4-210ENST00000473782 S100A9P06702 114 aaKnown RBP9.47□□□□□ -0.89
HPS4-210ENST00000473782 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
HPS4-210ENST00000473782 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
HPS4-210ENST00000473782 A0A087X002 238 aa9.46□□□□□ -0.9
HPS4-210ENST00000473782 Q5BKY6 102 aa9.46□□□□□ -0.9
HPS4-210ENST00000473782 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
HPS4-210ENST00000473782 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.9
HPS4-210ENST00000473782 ESDP10768 282 aa9.45□□□□□ -0.9
HPS4-210ENST00000473782 SS18Q15532 418 aa9.45□□□□□ -0.9
HPS4-210ENST00000473782 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
HPS4-210ENST00000473782 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
HPS4-210ENST00000473782 APCSP02743 223 aa9.44□□□□□ -0.9
HPS4-210ENST00000473782 DEFA1P59665 94 aa9.44□□□□□ -0.9
HPS4-210ENST00000473782 RNF151Q2KHN1 245 aa9.44□□□□□ -0.9
HPS4-210ENST00000473782 LYZL1Q6UWQ5 148 aa9.44□□□□□ -0.9
HPS4-210ENST00000473782 C19orf71A6NCJ1 209 aa9.43□□□□□ -0.9
HPS4-210ENST00000473782 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
HPS4-210ENST00000473782 TMUB2Q71RG4 321 aa9.43□□□□□ -0.9
HPS4-210ENST00000473782 OR2D3Q8NGH3 330 aa9.43□□□□□ -0.9
HPS4-210ENST00000473782 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
HPS4-210ENST00000473782 CDIP1Q9H305 208 aa9.43□□□□□ -0.9
HPS4-210ENST00000473782 AKR1C8PQ5T2L2 129 aa9.42□□□□□ -0.9
HPS4-210ENST00000473782 EIF5AL1Q6IS14 154 aaKnown RBP9.42□□□□□ -0.9
HPS4-210ENST00000473782 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
HPS4-210ENST00000473782 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
HPS4-210ENST00000473782 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
HPS4-210ENST00000473782 F2Z2F3 143 aa9.41□□□□□ -0.9
HPS4-210ENST00000473782 COX7A2LO14548 114 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms