RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 GFRA4Q9GZZ7 299 aa13.29□□□□□ -0.28
IMP4-213ENST00000473689 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
IMP4-213ENST00000473689 K7EN84 100 aa13.28□□□□□ -0.28
IMP4-213ENST00000473689 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.29
IMP4-213ENST00000473689 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.29
IMP4-213ENST00000473689 TWIST1Q15672 202 aa13.26□□□□□ -0.29
IMP4-213ENST00000473689 GATD1Q8NB37 220 aa13.26□□□□□ -0.29
IMP4-213ENST00000473689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.26□□□□□ -0.29
IMP4-213ENST00000473689 PANO1I0J062 215 aa13.25□□□□□ -0.29
IMP4-213ENST00000473689 CNBPP62633 177 aaKnown RBP13.25□□□□□ -0.29
IMP4-213ENST00000473689 GTSF1Q8WW33 167 aa13.25□□□□□ -0.29
IMP4-213ENST00000473689 LRP1Q07954 4544 aaKnown RBP13.25□□□□□ -0.29
IMP4-213ENST00000473689 COTL1Q14019 142 aa13.24□□□□□ -0.29
IMP4-213ENST00000473689 SLPIP03973 132 aa13.23□□□□□ -0.29
IMP4-213ENST00000473689 AMTP48728 403 aa13.23□□□□□ -0.29
IMP4-213ENST00000473689 Q6ZNX1 250 aa13.23□□□□□ -0.29
IMP4-213ENST00000473689 TRAV26-2A0A0B4J265 109 aa13.22□□□□□ -0.29
IMP4-213ENST00000473689 OXTP01178 125 aa13.22□□□□□ -0.29
IMP4-213ENST00000473689 hDV102S1A0JD36 115 aa13.21□□□□□ -0.29
IMP4-213ENST00000473689 TMEM250H0YL14 139 aa13.21□□□□□ -0.29
IMP4-213ENST00000473689 UBE2L6O14933 153 aa13.21□□□□□ -0.29
IMP4-213ENST00000473689 FOXA3P55318 350 aaPredicted RBP13.21□□□□□ -0.29
IMP4-213ENST00000473689 RPL37AP61513 92 aaKnown RBP13.21□□□□□ -0.29
IMP4-213ENST00000473689 CIRBPQ14011 172 aaKnown RBP13.21□□□□□ -0.29
IMP4-213ENST00000473689 LYPD6BQ8NI32 183 aa13.21□□□□□ -0.29
IMP4-213ENST00000473689 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
IMP4-213ENST00000473689 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
IMP4-213ENST00000473689 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
IMP4-213ENST00000473689 BLOC1S1P78537 153 aa13.18□□□□□ -0.3
IMP4-213ENST00000473689 GATCO43716 136 aaKnown RBP13.17□□□□□ -0.3
IMP4-213ENST00000473689 NCR2O95944 276 aa13.17□□□□□ -0.3
IMP4-213ENST00000473689 TEX261Q6UWH6 196 aa13.17□□□□□ -0.3
IMP4-213ENST00000473689 ALKAL2Q6UX46 152 aa13.17□□□□□ -0.3
IMP4-213ENST00000473689 A8MWL6 223 aa13.16□□□□□ -0.3
IMP4-213ENST00000473689 SMIM15Q7Z3B0 74 aa13.16□□□□□ -0.3
IMP4-213ENST00000473689 C15orf56Q8N910 161 aa13.16□□□□□ -0.3
IMP4-213ENST00000473689 AP5S1Q9NUS5 200 aa13.16□□□□□ -0.3
IMP4-213ENST00000473689 FAT3Q8TDW7 4589 aa13.16□□□□□ -0.3
IMP4-213ENST00000473689 IGHV3-64A0A075B6Q5 118 aa13.15□□□□□ -0.3
IMP4-213ENST00000473689 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.15□□□□□ -0.3
IMP4-213ENST00000473689 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
IMP4-213ENST00000473689 H7C423 109 aa13.15□□□□□ -0.3
IMP4-213ENST00000473689 AKAP14Q86UN6 197 aa13.15□□□□□ -0.3
IMP4-213ENST00000473689 SDHAF1A6NFY7 115 aa13.14□□□□□ -0.31
IMP4-213ENST00000473689 CT83Q5H943 113 aa13.14□□□□□ -0.31
IMP4-213ENST00000473689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
IMP4-213ENST00000473689 TRBV6-5A0A0K0K1A5 114 aa13.13□□□□□ -0.31
IMP4-213ENST00000473689 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
IMP4-213ENST00000473689 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
IMP4-213ENST00000473689 SERTAD4-AS1Q5TG53 156 aa13.13□□□□□ -0.31
IMP4-213ENST00000473689 CFAP161Q6P656 301 aa13.13□□□□□ -0.31
IMP4-213ENST00000473689 FGF6P10767 208 aa13.12□□□□□ -0.31
IMP4-213ENST00000473689 AMMECR1LQ6DCA0 310 aa13.12□□□□□ -0.31
IMP4-213ENST00000473689 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
IMP4-213ENST00000473689 HMCN2Q8NDA2 5059 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 A0A087WYN8 130 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 IGKV3OR2-268A0A0C4DH90 116 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 NDUFS6O75380 124 aaKnown RBP13.11□□□□□ -0.31
IMP4-213ENST00000473689 GAS8-AS1O95177 125 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 APCSP02743 223 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 RNASEKQ6P5S7 137 aaKnown RBP13.11□□□□□ -0.31
IMP4-213ENST00000473689 SPACA4Q8TDM5 124 aa13.11□□□□□ -0.31
IMP4-213ENST00000473689 CHCHD10Q8WYQ3 142 aaPredicted RBP13.11□□□□□ -0.31
IMP4-213ENST00000473689 I3L3M4 83 aa13.1□□□□□ -0.31
IMP4-213ENST00000473689 ESDP10768 282 aa13.09□□□□□ -0.31
IMP4-213ENST00000473689 PMCHP20382 165 aa13.09□□□□□ -0.31
IMP4-213ENST00000473689 CEBPGP53567 150 aa13.09□□□□□ -0.31
IMP4-213ENST00000473689 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
IMP4-213ENST00000473689 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
IMP4-213ENST00000473689 PKHD1L1Q86WI1 4243 aa13.08□□□□□ -0.32
IMP4-213ENST00000473689 ZNF25P17030 456 aaPredicted RBP13.08□□□□□ -0.32
IMP4-213ENST00000473689 RPS10P46783 165 aaKnown RBP13.08□□□□□ -0.32
IMP4-213ENST00000473689 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
IMP4-213ENST00000473689 FAM210AQ96ND0 272 aa13.08□□□□□ -0.32
IMP4-213ENST00000473689 TMEM191AQ9H0A3 160 aa13.08□□□□□ -0.32
IMP4-213ENST00000473689 PLAC8Q9NZF1 115 aa13.08□□□□□ -0.32
IMP4-213ENST00000473689 hCG_2014768A0A024R1R8 64 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 A0A1B0GUT8 65 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 TSHBP01222 138 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 POLR2KP53803 58 aaKnown RBP13.07□□□□□ -0.32
IMP4-213ENST00000473689 FOXI1Q12951 378 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 HIGD2BQ4VC39 106 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 OR5A1Q8NGJ0 315 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 SMIM7Q9BQ49 75 aa13.07□□□□□ -0.32
IMP4-213ENST00000473689 EIF5A2Q9GZV4 153 aaKnown RBP13.07□□□□□ -0.32
IMP4-213ENST00000473689 GVQW2A0A096LPI5 108 aaPredicted RBP13.06□□□□□ -0.32
IMP4-213ENST00000473689 RAB4AP20338 218 aa13.06□□□□□ -0.32
IMP4-213ENST00000473689 COX6A2Q02221 97 aa13.06□□□□□ -0.32
IMP4-213ENST00000473689 ST20Q9HBF5 79 aa13.06□□□□□ -0.32
IMP4-213ENST00000473689 OSTCQ9NRP0 149 aa13.06□□□□□ -0.32
IMP4-213ENST00000473689 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
IMP4-213ENST00000473689 Q6ZRU5 148 aa13.05□□□□□ -0.32
IMP4-213ENST00000473689 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
IMP4-213ENST00000473689 BORCS7Q96B45 105 aa13.05□□□□□ -0.32
IMP4-213ENST00000473689 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
IMP4-213ENST00000473689 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
IMP4-213ENST00000473689 ZNF727A8MUV8 499 aa13.04□□□□□ -0.32
IMP4-213ENST00000473689 TMEM242Q9NWH2 141 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms