RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 NDUFS6O75380 124 aaKnown RBP7.64□□□□□ -1.19
CPNE1-222ENST00000473373 RBX1P62877 108 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 WFDC2Q14508 124 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 IQCJQ1A5X6 159 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 AMMECR1LQ6DCA0 310 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 LINC00269Q8N2A0 174 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 TSKUQ8WUA8 353 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 CNFNQ9BYD5 112 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 OSTCQ9NRP0 149 aa7.64□□□□□ -1.19
CPNE1-222ENST00000473373 EPM2AB3EWF7 344 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 APCSP02743 223 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 PMCHP20382 165 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 RAB14P61106 215 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 HAMPP81172 84 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 RIGQ13278 110 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
CPNE1-222ENST00000473373 RPL39LQ96EH5 51 aaKnown RBP7.63□□□□□ -1.19
CPNE1-222ENST00000473373 GFRA4Q9GZZ7 299 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 NAT8Q9UHE5 227 aa7.63□□□□□ -1.19
CPNE1-222ENST00000473373 IGLV10-54A0A075B6I4 117 aa7.62□□□□□ -1.19
CPNE1-222ENST00000473373 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
CPNE1-222ENST00000473373 FOXA3P55318 350 aaPredicted RBP7.62□□□□□ -1.19
CPNE1-222ENST00000473373 REG3AQ06141 175 aa7.62□□□□□ -1.19
CPNE1-222ENST00000473373 ENHOQ6UWT2 76 aa7.62□□□□□ -1.19
CPNE1-222ENST00000473373 SDHAF1A6NFY7 115 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 A6NJY4 79 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 SMR3BP02814 79 aaPredicted RBP7.61□□□□□ -1.19
CPNE1-222ENST00000473373 RPL23P62829 140 aaKnown RBP7.61□□□□□ -1.19
CPNE1-222ENST00000473373 ISOC2Q96AB3 205 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 BTF3L4Q96K17 158 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 TMEM70Q9BUB7 260 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 ST20Q9HBF5 79 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 NAT8BQ9UHF3 227 aa7.61□□□□□ -1.19
CPNE1-222ENST00000473373 FAM231BA6NCW3 169 aa7.6□□□□□ -1.19
CPNE1-222ENST00000473373 FAM229AH3BQW9 127 aa7.6□□□□□ -1.19
CPNE1-222ENST00000473373 SMDT1Q9H4I9 107 aa7.6□□□□□ -1.19
CPNE1-222ENST00000473373 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
CPNE1-222ENST00000473373 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
CPNE1-222ENST00000473373 USP17L23D6RBM5 183 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 I3L3M4 83 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 NCR2O95944 276 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 XGP55808 180 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 LINC01620Q4KN68 170 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 TMEM101Q96IK0 257 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 TMEM191AQ9H0A3 160 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 V9GYV3 84 aa7.59□□□□□ -1.19
CPNE1-222ENST00000473373 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 TRAV8-4A0A0B4J246 113 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 A0A1B0GUV1 79 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 INAFM2P0DMQ5 153 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 FCER1GP30273 86 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 CAMPP49913 170 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 SRSF3P84103 164 aaKnown RBP7.58□□□□□ -1.2
CPNE1-222ENST00000473373 Q5VSD8 79 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 AMN1Q8IY45 258 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 NUP35Q8NFH5 326 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 MRAP2Q96G30 205 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 AP5S1Q9NUS5 200 aa7.58□□□□□ -1.2
CPNE1-222ENST00000473373 C20orf203Q8NBC4 194 aa7.57□□□□□ -1.2
CPNE1-222ENST00000473373 PRR34Q9NV39 138 aa7.57□□□□□ -1.2
CPNE1-222ENST00000473373 TMEM242Q9NWH2 141 aa7.57□□□□□ -1.2
CPNE1-222ENST00000473373 hDV102S1A0JD36 115 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 C9JQL5 133 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 PPP1R17O96001 155 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 S100A8P05109 93 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 RAB4AP20338 218 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 DGAT2L7PQ6IED9 249 aa7.56□□□□□ -1.2
CPNE1-222ENST00000473373 H7C423 109 aa7.55□□□□□ -1.2
CPNE1-222ENST00000473373 FGF6P10767 208 aa7.55□□□□□ -1.2
CPNE1-222ENST00000473373 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
CPNE1-222ENST00000473373 OR5A1Q8NGJ0 315 aa7.55□□□□□ -1.2
CPNE1-222ENST00000473373 FAM30AQ9NZY2 134 aa7.55□□□□□ -1.2
CPNE1-222ENST00000473373 TRBV6-5A0A0K0K1A5 114 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 A0A1B0GW15 77 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 C7orf77A4D0Y5 90 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 F8W036 122 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 ZNF25P17030 456 aaPredicted RBP7.54□□□□□ -1.2
CPNE1-222ENST00000473373 CKS2P33552 79 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
CPNE1-222ENST00000473373 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 CLRN3Q8NCR9 226 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 RNF185Q96GF1 192 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
CPNE1-222ENST00000473373 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.53□□□□□ -1.2
CPNE1-222ENST00000473373 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 VCYO14598 125 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 PRSS1P07477 247 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 RPS10P46783 165 aaKnown RBP7.53□□□□□ -1.2
CPNE1-222ENST00000473373 HBBP68871 147 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 DPH3Q96FX2 82 aa7.53□□□□□ -1.2
CPNE1-222ENST00000473373 TSHBP01222 138 aa7.52□□□□□ -1.21
CPNE1-222ENST00000473373 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
CPNE1-222ENST00000473373 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
CPNE1-222ENST00000473373 SS18Q15532 418 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms