RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 BVES-AS1Q5T3Y7 98 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 Q6ZVH6 145 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 GTF2H5Q6ZYL4 71 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 C1orf158Q8N1D5 194 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 MTURNQ8N3F0 131 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 C9orf85Q96MD7 179 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 AP1S3Q96PC3 154 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 LINC00467Q9BRT7 94 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 ST20Q9HBF5 79 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 MSRB1Q9NZV6 116 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 MDFICQ9P1T7 246 aa4.57□□□□□ -1.68
HDAC1-205ENST00000472928 KLK5Q9Y337 293 aaPredicted RBP4.57□□□□□ -1.68
HDAC1-205ENST00000472928 PRM2P04554 102 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 NTF3P20783 257 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 APOC4P55056 127 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 KIAA1644Q3SXP7 199 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 AMMECR1LQ6DCA0 310 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 UFSP1Q6NVU6 142 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 NEGR1Q7Z3B1 354 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 GATD1Q8NB37 220 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 PMCHL2Q9BQD1 86 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 SCRT2Q9NQ03 307 aa4.56□□□□□ -1.68
HDAC1-205ENST00000472928 IGHV4-4A0A075B6R2 117 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 MGPP08493 103 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 SRIP30626 198 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 SEC11AP67812 179 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 DEFB135Q30KP9 77 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 ZNF493Q6ZR52 646 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 AMN1Q8IY45 258 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 C11orf72Q8NBR9 251 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 KIR2DL5BQ8NHK3 375 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 TMEM263Q8WUH6 116 aaKnown RBP4.55□□□□□ -1.68
HDAC1-205ENST00000472928 PHLDA1Q8WV24 401 aaPredicted RBP4.55□□□□□ -1.68
HDAC1-205ENST00000472928 SIGMAR1Q99720 223 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 DNAH5Q8TE73 4624 aa4.55□□□□□ -1.68
HDAC1-205ENST00000472928 M0R2P5 195 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 NCR2O95944 276 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 AZU1P20160 251 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 EVI2AP22794 236 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 RRN3P1Q2M238 152 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 ZNF876PQ49A33 203 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 MRPL51Q4U2R6 128 aaKnown RBP4.54□□□□□ -1.68
HDAC1-205ENST00000472928 FAM104BQ5XKR9 115 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 SLC25A34Q6PIV7 304 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 LINC00336Q6ZUF6 198 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 CSNK1G2-AS1Q8NCQ2 148 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 OR5A1Q8NGJ0 315 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 C16orf74Q96GX8 76 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 TMEM191AQ9H0A3 160 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 DPH3P1Q9H4G8 78 aa4.54□□□□□ -1.68
HDAC1-205ENST00000472928 MRPL16Q9NX20 251 aaKnown RBP4.54□□□□□ -1.68
HDAC1-205ENST00000472928 SRRM2Q9UQ35 2752 aaKnown RBP4.54□□□□□ -1.68
HDAC1-205ENST00000472928 TRGV1A0A0A0MS02 117 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 TRAV26-2A0A0B4J265 109 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 D6R8Y8 96 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 H3BRM9 83 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 K7EP34 96 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 NUDT3O95989 172 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 PMCHP20382 165 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 FOXI1Q12951 378 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 ZNF56Q15929 161 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 MPV17L2Q567V2 206 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 FAM74A4Q5TZK3 123 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 C14orf178Q8N769 122 aaPredicted RBP4.53□□□□□ -1.68
HDAC1-205ENST00000472928 RNF185Q96GF1 192 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 SPXQ9BT56 116 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 JPT2Q9H910 190 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 TP53TG1Q9Y2A0 90 aa4.53□□□□□ -1.68
HDAC1-205ENST00000472928 TRAV8-6A0A0B4J262 113 aa4.52□□□□□ -1.69
HDAC1-205ENST00000472928 CKS2P33552 79 aa4.52□□□□□ -1.69
HDAC1-205ENST00000472928 EMP1P54849 157 aa4.52□□□□□ -1.69
HDAC1-205ENST00000472928 C18orf32Q8TCD1 76 aa4.52□□□□□ -1.69
HDAC1-205ENST00000472928 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
HDAC1-205ENST00000472928 NOP10Q9NPE3 64 aaKnown RBP4.52□□□□□ -1.69
HDAC1-205ENST00000472928 PLAC8L1A1L4L8 177 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 A6NDN8 102 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 A8MWV9 139 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 J3QR89 54 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 RHODO00212 210 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 PRYO14603 147 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 RTL8CO15255 209 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 NPYP01303 97 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 GATA1P15976 413 aaPredicted RBP4.51□□□□□ -1.69
HDAC1-205ENST00000472928 NANOS2P60321 138 aaKnown RBP4.51□□□□□ -1.69
HDAC1-205ENST00000472928 DAZ2Q13117 558 aaKnown RBP4.51□□□□□ -1.69
HDAC1-205ENST00000472928 PIK3CD-AS1Q5SR53 167 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
HDAC1-205ENST00000472928 Q6ZTI0 123 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 FA2HQ7L5A8 372 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 OR11H2Q8NH07 326 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 PTH2Q96A98 100 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 RNF183Q96D59 192 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 MRAP2Q96G30 205 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 TMEM70Q9BUB7 260 aa4.51□□□□□ -1.69
HDAC1-205ENST00000472928 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms