RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 SLC25A29Q8N8R3 303 aa7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 TMEM70Q9BUB7 260 aa7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 DAZ3Q9NR90 486 aaKnown RBP7.4□□□□□ -1.22
SMARCD3-208ENST00000472789 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 PAX4O43316 350 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 LAGE3Q14657 143 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 TMEM97Q5BJF2 176 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 SH2D6Q7Z4S9 175 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 ZNRF2Q8NHG8 242 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 LINC00476Q8WZB0 136 aa7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 PACRGQ96M98 296 aaPredicted RBP7.39□□□□□ -1.23
SMARCD3-208ENST00000472789 LINC01546A6NGU7 62 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 AMTP48728 403 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 CRYBA4P53673 196 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 Q6ZSN1 163 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 UBE2DNLQ8IWF7 75 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 C15orf53Q8NAA6 179 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
SMARCD3-208ENST00000472789 NACAE9PAV3 2078 aa7.37□□□□□ -1.23
SMARCD3-208ENST00000472789 SMAGPQ0VAQ4 97 aa7.37□□□□□ -1.23
SMARCD3-208ENST00000472789 COTL1Q14019 142 aa7.37□□□□□ -1.23
SMARCD3-208ENST00000472789 HIST3H2BBQ8N257 126 aa7.37□□□□□ -1.23
SMARCD3-208ENST00000472789 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
SMARCD3-208ENST00000472789 IGLV2-18A0A075B6J9 118 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 GAGE12JA6NER3 117 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 H3BNG1 76 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 HBDP02042 147 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 P0DMU3 169 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 FAM231AP0DMU4 169 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 FAM231CP0DMU5 169 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 GYPEP15421 78 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 GAGE1Q13065 139 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 GAGE4Q13068 117 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 GAGE5Q13069 117 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 MRPL23Q16540 153 aaKnown RBP7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 PDZD11Q5EBL8 140 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 LGALS9CQ6DKI2 356 aa7.36□□□□□ -1.23
SMARCD3-208ENST00000472789 LEPROTL1O95214 131 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 FABP4P15090 132 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 BTF3P20290 206 aaKnown RBP7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 UBE2D3P61077 147 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 UBE2D2P62837 147 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 VSIG2Q96IQ7 327 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 GTSF1LQ9H1H1 148 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 ICOSQ9Y6W8 199 aa7.35□□□□□ -1.23
SMARCD3-208ENST00000472789 KMT2AQ03164 3969 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 NUPR1O60356 82 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 ATP5LO75964 103 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 FAM19A2Q8N3H0 131 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 ATP6V0E2Q8NHE4 81 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 URB1-AS1Q96HZ7 61 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 HIST1H2BLQ99880 126 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 CYSLTR1Q9Y271 337 aa7.34□□□□□ -1.23
SMARCD3-208ENST00000472789 A0A096LPF7 62 aa7.33□□□□□ -1.24
SMARCD3-208ENST00000472789 CCL18P55774 89 aa7.33□□□□□ -1.24
SMARCD3-208ENST00000472789 LINC00310P59036 64 aa7.33□□□□□ -1.24
SMARCD3-208ENST00000472789 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
SMARCD3-208ENST00000472789 KIAA1109Q2LD37 5005 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 TRBV25-1A0A075B6N4 114 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 TSHBP01222 138 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 AKR1D1P51857 326 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 NEGR1Q7Z3B1 354 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 TOMM6Q96B49 74 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
SMARCD3-208ENST00000472789 IGHV3-38A0A0C4DH36 116 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 LOC100131303A0A0U1RQF7 123 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 H7C423 109 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 UBE2L6O14933 153 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 PKIAP61925 76 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 PMCHL1Q16048 86 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 OR10D4PQ8NGN7 298 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 SCGB3A1Q96QR1 104 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 Q9UF83 564 aa7.31□□□□□ -1.24
SMARCD3-208ENST00000472789 NPSP0C0P6 89 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 LINC00694P0DN24 101 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 DGAT2L7PQ6IED9 249 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 Q6ZN92 141 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 ERASQ7Z444 233 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 C20orf203Q8NBC4 194 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 TMEM141Q96I45 108 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 LINC00588Q9Y4M8 146 aa7.3□□□□□ -1.24
SMARCD3-208ENST00000472789 TRBV6-8A0A0A6YYG3 113 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 LOC105371267A0A1B0GV96 52 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 C20orf202A1L168 122 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 M0R2N4 97 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 ESRGQ1W209 222 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 IFI27L1Q96BM0 104 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
SMARCD3-208ENST00000472789 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
SMARCD3-208ENST00000472789 PRSS1P07477 247 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms