RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 ARHGEF5Q12774 1597 aa-0.17□□□□□ -2.44
CLK1-209ENST00000472679 UBR1Q8IWV7 1749 aa-0.17□□□□□ -2.44
CLK1-209ENST00000472679 ARAP2Q8WZ64 1704 aa-0.17□□□□□ -2.44
CLK1-209ENST00000472679 NRXN3Q9Y4C0 1643 aa-0.17□□□□□ -2.44
CLK1-209ENST00000472679 PZPP20742 1482 aa-0.17□□□□□ -2.44
CLK1-209ENST00000472679 ATP7BP35670 1465 aa-0.17□□□□□ -2.44
CLK1-209ENST00000472679 AFDNP55196 1824 aaKnown RBP-0.17□□□□□ -2.44
CLK1-209ENST00000472679 PLCH1Q4KWH8 1693 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 KIF21AQ7Z4S6 1674 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 QRICH2Q9H0J4 1663 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 UBR3Q6ZT12 1888 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 POLR1AO95602 1720 aaPredicted RBP-0.18□□□□□ -2.44
CLK1-209ENST00000472679 NUP188Q5SRE5 1749 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 TROQ12816 1431 aaPredicted RBP-0.18□□□□□ -2.44
CLK1-209ENST00000472679 TRBV27A0A0K0K1C4 114 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 PPP5D1E7EU14 171 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 FXYD1O00168 92 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 MT1GP13640 62 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 LINC00305Q7Z4B0 112 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 DPH3P1Q9H4G8 78 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 MPC1Q9Y5U8 109 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 ABCA6Q8N139 1617 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 ADCY10Q96PN6 1610 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 UHRF1BP1LA0JNW5 1464 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 POLA1P09884 1462 aaPredicted RBP-0.18□□□□□ -2.44
CLK1-209ENST00000472679 NEXMIFQ5QGS0 1516 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 NINQ8N4C6 2090 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 LY75O60449 1722 aa-0.18□□□□□ -2.44
CLK1-209ENST00000472679 TNS1Q9HBL0 1735 aaKnown RBP-0.18□□□□□ -2.44
CLK1-209ENST00000472679 MAST1Q9Y2H9 1570 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 G0S2P27469 103 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 Q5XG85 94 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 HRCT1Q6UXD1 115 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 COX6B2Q6YFQ2 88 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 MT1MQ8N339 61 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 ATP10BO94823 1461 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 MRC1P22897 1456 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 KIF1AQ12756 1690 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 PBRM1Q86U86 1689 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 DOT1LQ8TEK3 1739 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 ANKRD26Q9UPS8 1709 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 SAMD9Q5K651 1589 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 USF3Q68DE3 2245 aa-0.19□□□□□ -2.44
CLK1-209ENST00000472679 HFM1A2PYH4 1435 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 PARP4Q9UKK3 1724 aaKnown RBP-0.2□□□□□ -2.44
CLK1-209ENST00000472679 LOC107986453A0A1B0GWG9 222 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 CDC42EP2O14613 210 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 IGKCP01834 107 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 DNAJB13P59910 316 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 TMEM78Q5T7P6 136 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 STX12Q86Y82 276 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 LAMTOR2Q9Y2Q5 125 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 ZFYVE16Q7Z3T8 1539 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 ABCC2Q92887 1545 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 EIF4G3O43432 1585 aaKnown RBP-0.2□□□□□ -2.44
CLK1-209ENST00000472679 TIAM1Q13009 1591 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 TTC37Q6PGP7 1564 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 DIP2CQ9Y2E4 1556 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 ESPL1Q14674 2120 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 ANKRD30AQ9BXX3 1397 aa-0.2□□□□□ -2.44
CLK1-209ENST00000472679 NHSQ6T4R5 1651 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 FHAD1B1AJZ9 1412 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 ANKRD50Q9ULJ7 1429 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 TMEM30CPA0ZSE6 113 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 CCSMST1Q4G0I0 132 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 TRIQKQ629K1 86 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.21□□□□□ -2.44
CLK1-209ENST00000472679 MORN4Q8NDC4 146 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 DPH3Q96FX2 82 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 LINC01600Q96MT4 127 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 C3P01024 1663 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 LRRC37AA6NMS7 1700 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 SUPT6HQ7KZ85 1726 aaKnown RBP-0.21□□□□□ -2.44
CLK1-209ENST00000472679 DAPK1P53355 1430 aa-0.21□□□□□ -2.44
CLK1-209ENST00000472679 FANCAO15360 1455 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 CCDC18Q5T9S5 1454 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 ARHGAP35Q9NRY4 1499 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 MAP2P11137 1827 aaKnown RBP-0.22□□□□□ -2.44
CLK1-209ENST00000472679 DNAJC13O75165 2243 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 MROH2BQ7Z745 1585 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 TRAV13-1A0A0B4J241 112 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 HIGD1CA8MV81 97 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 H0YAA0 97 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 EDF1O60869 148 aaKnown RBP-0.22□□□□□ -2.44
CLK1-209ENST00000472679 SLC25A4P12235 298 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 LYPD5Q6UWN5 251 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 FDCSPQ8NFU4 85 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 CENPHQ9H3R5 247 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 ITSN2Q9NZM3 1697 aa-0.22□□□□□ -2.44
CLK1-209ENST00000472679 RRBP1Q9P2E9 1410 aaKnown RBP-0.22□□□□□ -2.45
CLK1-209ENST00000472679 CCDC88BA6NC98 1476 aa-0.22□□□□□ -2.45
CLK1-209ENST00000472679 A2ML1A8K2U0 1454 aa-0.22□□□□□ -2.45
CLK1-209ENST00000472679 EFCAB5A4FU69 1503 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 PTPN23Q9H3S7 1636 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 ITSN1Q15811 1721 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 PKD1L3Q7Z443 1732 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 GTF2A1P52655 376 aaPredicted RBP-0.23□□□□□ -2.45
CLK1-209ENST00000472679 HAMPP81172 84 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 Q5VV11 94 aa-0.23□□□□□ -2.45
CLK1-209ENST00000472679 OR8J3Q8NGG0 315 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms