RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 Q86TA4 180 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 INO80EQ8NBZ0 244 aaPredicted RBP2.26□□□□□ -2.05
XRN1-209ENST00000472625 OR2T35Q8NGX2 323 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 STOML3Q8TAV4 291 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 SFRP2Q96HF1 295 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 AP1S3Q96PC3 154 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 CHCHD5Q9BSY4 110 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 SMIM3Q9BZL3 60 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 LINC00474Q9P2X8 69 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 IGKV3D-20A0A0C4DH25 116 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 IGHV1-24A0A0C4DH33 117 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 TRBV6-1A0A0K0K1D8 114 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 XKRY2A2RUG3 117 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 KRBOX1C9JBD0 128 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 UBE2L6O14933 153 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 PFDN1O60925 122 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 UPK1BO75841 260 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 SIX6O95475 246 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 ARMS2P0C7Q2 107 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 FHITP49789 147 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 ZNF80P51504 273 aaPredicted RBP2.25□□□□□ -2.05
XRN1-209ENST00000472625 H2BFSP57053 126 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 KRTAP10-4P60372 401 aaPredicted RBP2.25□□□□□ -2.05
XRN1-209ENST00000472625 AKR1C8PQ5T2L2 129 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 SPANXN1Q5VSR9 72 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 REG3GQ6UW15 175 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 C14orf178Q8N769 122 aaPredicted RBP2.25□□□□□ -2.05
XRN1-209ENST00000472625 C15orf54Q8N8G6 183 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 TVP23CQ96ET8 276 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 DNAJC30Q96LL9 226 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 AQP10Q96PS8 301 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 MARVELD1Q9BSK0 173 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
XRN1-209ENST00000472625 MED28Q9H204 178 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 PRR34Q9NV39 138 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 VAX2Q9UIW0 290 aa2.25□□□□□ -2.05
XRN1-209ENST00000472625 IGLV10-54A0A075B6I4 117 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 IGLV5-45A0A087WSX0 123 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 M0R036 132 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 SH2D1AO60880 128 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 LTAP01374 205 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 OR5AL1P0C617 328 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 ATP6V0CP27449 155 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 AKR1C3P42330 323 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 REG3AQ06141 175 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 GAGE6Q13070 117 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 CIRBPQ14011 172 aaKnown RBP2.24□□□□□ -2.05
XRN1-209ENST00000472625 IQCJQ1A5X6 159 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 ZNF674Q2M3X9 581 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 MPV17L2Q567V2 206 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 DPH3Q96FX2 82 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 PGLYRP4Q96LB8 373 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 SGK494Q96LW2 274 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 FAM210AQ96ND0 272 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 DERL1Q9BUN8 251 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 SAMD10Q9BYL1 202 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
XRN1-209ENST00000472625 MAP1LC3B2A6NCE7 125 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 FAM74A7A6NL05 159 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 KRTAP16-1A8MUX0 517 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 UMAD1C9J7I0 102 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 TEX46H3BTG2 121 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 SNAI2O43623 268 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 NDUFS6O75380 124 aaKnown RBP2.23□□□□□ -2.05
XRN1-209ENST00000472625 PRSS1P07477 247 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 GIPP09681 153 aaPredicted RBP2.23□□□□□ -2.05
XRN1-209ENST00000472625 TRGC1P0CF51 173 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 SULT1A2P50226 295 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 UBE2G2P60604 165 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 RPS20P60866 119 aaKnown RBP2.23□□□□□ -2.05
XRN1-209ENST00000472625 RBX1P62877 108 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 CACNG7P62955 275 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 SMAGPQ0VAQ4 97 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 LINC01620Q4KN68 170 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 PRR27Q6MZM9 219 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 ENHOQ6UWT2 76 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 LINC00269Q8N2A0 174 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 SPACA4Q8TDM5 124 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 SMIM12Q96EX1 92 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 TMEM243Q9BU79 118 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 MAP1LC3BQ9GZQ8 125 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 BIN3Q9NQY0 253 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 PLAC8Q9NZF1 115 aa2.23□□□□□ -2.05
XRN1-209ENST00000472625 TMSB15BA0A087X1C1 80 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 A0A0U1RQV1 116 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 F2Z2F3 143 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 H7C423 109 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 ZNF25P17030 456 aaPredicted RBP2.22□□□□□ -2.05
XRN1-209ENST00000472625 RPS10P46783 165 aaKnown RBP2.22□□□□□ -2.05
XRN1-209ENST00000472625 EIF5AP63241 154 aaKnown RBP2.22□□□□□ -2.05
XRN1-209ENST00000472625 COTL1Q14019 142 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 CST9LP1Q5W188 147 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 TEX261Q6UWH6 196 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 SPINK6Q6UWN8 80 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 SDIM1Q6ZPB5 146 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 SMIM15Q7Z3B0 74 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 TSKUQ8WUA8 353 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms