RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 TIMM21Q9BVV7 248 aa15.12■□□□□ 0.01
SNX21-209ENST00000472219 UBE2D3P61077 147 aa15.11■□□□□ 0.01
SNX21-209ENST00000472219 UBE2D2P62837 147 aa15.11■□□□□ 0.01
SNX21-209ENST00000472219 CHCHD7Q9BUK0 85 aa15.11■□□□□ 0.01
SNX21-209ENST00000472219 ZFYVE26Q68DK2 2539 aa15.11■□□□□ 0.01
SNX21-209ENST00000472219 LOC107984156A0A0G2JMH3 177 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 CMC4P56277 68 aaPredicted RBP15.1■□□□□ 0.01
SNX21-209ENST00000472219 ODF3L2Q3SX64 289 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 ARL17AQ8IVW1 177 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 C10orf126Q8N4M7 172 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 TRBV20-1A0A075B6N2 111 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 TINCRA0A1B0GVN0 87 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 CCL24O00175 119 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 CFC1BP0CG36 223 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 CFC1P0CG37 223 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 PRO1854Q9UHT4 67 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 PRO0461Q9UI25 63 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 UBE2D4Q9Y2X8 147 aa15.1■□□□□ 0.01
SNX21-209ENST00000472219 PRM2P04554 102 aa15.09■□□□□ 0.01
SNX21-209ENST00000472219 Q6ZSN1 163 aa15.09■□□□□ 0.01
SNX21-209ENST00000472219 NACAE9PAV3 2078 aa15.08■□□□□ 0
SNX21-209ENST00000472219 MXRA5Q9NR99 2828 aa15.08■□□□□ 0
SNX21-209ENST00000472219 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.08■□□□□ 0
SNX21-209ENST00000472219 IGHV3-30-3P0DP02 117 aa15.08■□□□□ 0
SNX21-209ENST00000472219 WFDC11Q8NEX6 87 aa15.08■□□□□ 0
SNX21-209ENST00000472219 XCL2Q9UBD3 114 aa15.08■□□□□ 0
SNX21-209ENST00000472219 IGHV3-64A0A075B6Q5 118 aa15.07■□□□□ 0
SNX21-209ENST00000472219 IGHV1-58A0A0C4DH39 117 aa15.07■□□□□ 0
SNX21-209ENST00000472219 FAM104AQ969W3 186 aa15.07■□□□□ 0
SNX21-209ENST00000472219 PSMB2P49721 201 aa15.06■□□□□ 0
SNX21-209ENST00000472219 ETDBQ3ZM63 59 aa15.06■□□□□ 0
SNX21-209ENST00000472219 A0A0B4J2C4 111 aa15.06■□□□□ 0
SNX21-209ENST00000472219 TSSC4Q9Y5U2 329 aaPredicted RBP15.06■□□□□ 0
SNX21-209ENST00000472219 CSMD2Q7Z408 3487 aa15.05■□□□□ 0
SNX21-209ENST00000472219 A0A0J9YXY3 114 aa15.05■□□□□ -0
SNX21-209ENST00000472219 CEMP1Q6PRD7 247 aaPredicted RBP15.05■□□□□ -0
SNX21-209ENST00000472219 ATP6V0E2Q8NHE4 81 aa15.05■□□□□ -0
SNX21-209ENST00000472219 ABCA12Q86UK0 2595 aa15.05■□□□□ -0
SNX21-209ENST00000472219 A0A1W2PRX2 142 aa15.04■□□□□ -0
SNX21-209ENST00000472219 A4D1N5 150 aa15.04■□□□□ -0
SNX21-209ENST00000472219 AZU1P20160 251 aa15.04■□□□□ -0
SNX21-209ENST00000472219 IL17DQ8TAD2 202 aa15.04■□□□□ -0
SNX21-209ENST00000472219 GEMIN7Q9H840 131 aaKnown RBP15.04■□□□□ -0
SNX21-209ENST00000472219 CENPEQ02224 2701 aa15.04■□□□□ -0
SNX21-209ENST00000472219 MYO9AB2RTY4 2548 aa15.04■□□□□ -0
SNX21-209ENST00000472219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.03■□□□□ -0
SNX21-209ENST00000472219 IGKV2-29A2NJV5 120 aaPredicted RBP15.03■□□□□ -0
SNX21-209ENST00000472219 TEX15Q9BXT5 2789 aa15.03■□□□□ -0
SNX21-209ENST00000472219 TRBV10-1A0A0K0K1A3 114 aa15.03■□□□□ -0
SNX21-209ENST00000472219 C1orf158Q8N1D5 194 aa15.03■□□□□ -0
SNX21-209ENST00000472219 SMAGPQ0VAQ4 97 aa15.02■□□□□ -0
SNX21-209ENST00000472219 DGAT2L7PQ6IED9 249 aa15.02■□□□□ -0
SNX21-209ENST00000472219 SH2D6Q7Z4S9 175 aa15.02■□□□□ -0
SNX21-209ENST00000472219 TMEM263Q8WUH6 116 aaKnown RBP15.02■□□□□ -0
SNX21-209ENST00000472219 VSIG2Q96IQ7 327 aa15.02■□□□□ -0
SNX21-209ENST00000472219 IGHV3OR16-12A0A075B7B8 117 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 TRGV1A0A0A0MS02 117 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 SCGB1C2P0DMR2 95 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 Q6ZUT4 128 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 MUSTN1Q8IVN3 82 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 C16orf95Q9H693 158 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 ESM1Q9NQ30 184 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 Q9UF83 564 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 NDUFA12Q9UI09 145 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 C11orf44Q8N8P7 122 aa15.01□□□□□ -0.01
SNX21-209ENST00000472219 IGHV3-38A0A0C4DH36 116 aa15□□□□□ -0.01
SNX21-209ENST00000472219 TIRAPP58753 221 aa15□□□□□ -0.01
SNX21-209ENST00000472219 RPL36AP83881 106 aaKnown RBP15□□□□□ -0.01
SNX21-209ENST00000472219 RNASE13Q5GAN3 156 aaKnown RBP15□□□□□ -0.01
SNX21-209ENST00000472219 RPL36ALQ969Q0 106 aaKnown RBP15□□□□□ -0.01
SNX21-209ENST00000472219 C1QTNF4Q9BXJ3 329 aa15□□□□□ -0.01
SNX21-209ENST00000472219 ERG28Q9UKR5 140 aa15□□□□□ -0.01
SNX21-209ENST00000472219 RNASE1P07998 156 aaKnown RBP14.99□□□□□ -0.01
SNX21-209ENST00000472219 SFTA2Q6UW10 78 aa14.99□□□□□ -0.01
SNX21-209ENST00000472219 MTURNQ8N3F0 131 aa14.99□□□□□ -0.01
SNX21-209ENST00000472219 CITED2Q99967 270 aaPredicted RBP14.99□□□□□ -0.01
SNX21-209ENST00000472219 DAZ2Q13117 558 aaKnown RBP14.99□□□□□ -0.01
SNX21-209ENST00000472219 DAZ4Q86SG3 579 aaKnown RBP14.99□□□□□ -0.01
SNX21-209ENST00000472219 FAM110AQ9BQ89 295 aa14.99□□□□□ -0.01
SNX21-209ENST00000472219 SPANXDQ9BXN6 97 aa14.99□□□□□ -0.01
SNX21-209ENST00000472219 DAZ3Q9NR90 486 aaKnown RBP14.99□□□□□ -0.01
SNX21-209ENST00000472219 SPANXCQ9NY87 97 aa14.99□□□□□ -0.01
SNX21-209ENST00000472219 TRAV8-3A0A0A6YYJ7 113 aa14.98□□□□□ -0.01
SNX21-209ENST00000472219 TRAV4A0A0B4J268 109 aa14.98□□□□□ -0.01
SNX21-209ENST00000472219 K7EQD1 137 aa14.98□□□□□ -0.01
SNX21-209ENST00000472219 IGHV3-33P01772 117 aa14.98□□□□□ -0.01
SNX21-209ENST00000472219 HIST2H2BDQ6DRA6 164 aa14.98□□□□□ -0.01
SNX21-209ENST00000472219 TCL1BO95988 128 aa14.97□□□□□ -0.01
SNX21-209ENST00000472219 IGLV5-45A0A087WSX0 123 aa14.97□□□□□ -0.01
SNX21-209ENST00000472219 ZFAND6Q6FIF0 208 aa14.97□□□□□ -0.01
SNX21-209ENST00000472219 LINC01006Q8NI28 216 aa14.97□□□□□ -0.01
SNX21-209ENST00000472219 YAE1D1Q9NRH1 226 aa14.97□□□□□ -0.01
SNX21-209ENST00000472219 TIMM17BO60830 172 aa14.96□□□□□ -0.01
SNX21-209ENST00000472219 SPINK8P0C7L1 97 aa14.96□□□□□ -0.01
SNX21-209ENST00000472219 HERVK_113P63121 156 aa14.96□□□□□ -0.01
SNX21-209ENST00000472219 ZNF418Q8TF45 676 aaPredicted RBP14.96□□□□□ -0.01
SNX21-209ENST00000472219 CSDC2Q9Y534 153 aaKnown RBP14.96□□□□□ -0.01
SNX21-209ENST00000472219 LITAFQ99732 161 aa14.95□□□□□ -0.02
SNX21-209ENST00000472219 GAGE12HA6NDE8 117 aa14.95□□□□□ -0.02
SNX21-209ENST00000472219 CIDEAO60543 219 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms