RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 TRAV8-4A0A0B4J246 113 aa14.53□□□□□ -0.08
C9orf3-213ENST00000471978 UBE2L6O14933 153 aa14.53□□□□□ -0.08
C9orf3-213ENST00000471978 CNFNQ9BYD5 112 aa14.53□□□□□ -0.08
C9orf3-213ENST00000471978 RNASE7Q9H1E1 156 aaKnown RBP14.53□□□□□ -0.08
C9orf3-213ENST00000471978 K7EN84 100 aa14.52□□□□□ -0.09
C9orf3-213ENST00000471978 COTL1Q14019 142 aa14.52□□□□□ -0.09
C9orf3-213ENST00000471978 OCC1Q8TAD7 63 aa14.52□□□□□ -0.09
C9orf3-213ENST00000471978 GFRA4Q9GZZ7 299 aa14.52□□□□□ -0.09
C9orf3-213ENST00000471978 AMTP48728 403 aa14.51□□□□□ -0.09
C9orf3-213ENST00000471978 FAT3Q8TDW7 4589 aa14.5□□□□□ -0.09
C9orf3-213ENST00000471978 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-213ENST00000471978 TRAV26-2A0A0B4J265 109 aa14.49□□□□□ -0.09
C9orf3-213ENST00000471978 hDV102S1A0JD36 115 aa14.49□□□□□ -0.09
C9orf3-213ENST00000471978 RPL37AP61513 92 aaKnown RBP14.49□□□□□ -0.09
C9orf3-213ENST00000471978 SDIM1Q6ZPB5 146 aa14.49□□□□□ -0.09
C9orf3-213ENST00000471978 GATD1Q8NB37 220 aa14.49□□□□□ -0.09
C9orf3-213ENST00000471978 CNBPP62633 177 aaKnown RBP14.48□□□□□ -0.09
C9orf3-213ENST00000471978 PKHD1L1Q86WI1 4243 aa14.47□□□□□ -0.09
C9orf3-213ENST00000471978 GTSF1Q8WW33 167 aa14.47□□□□□ -0.09
C9orf3-213ENST00000471978 PANO1I0J062 215 aa14.46□□□□□ -0.09
C9orf3-213ENST00000471978 SMIM15Q7Z3B0 74 aa14.46□□□□□ -0.09
C9orf3-213ENST00000471978 AP5S1Q9NUS5 200 aa14.46□□□□□ -0.09
C9orf3-213ENST00000471978 OXTP01178 125 aa14.45□□□□□ -0.1
C9orf3-213ENST00000471978 RPL39LQ96EH5 51 aaKnown RBP14.45□□□□□ -0.1
C9orf3-213ENST00000471978 TMEM250H0YL14 139 aa14.44□□□□□ -0.1
C9orf3-213ENST00000471978 FOXA3P55318 350 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-213ENST00000471978 Q6ZNX1 250 aa14.44□□□□□ -0.1
C9orf3-213ENST00000471978 GATCO43716 136 aaKnown RBP14.43□□□□□ -0.1
C9orf3-213ENST00000471978 BLOC1S1P78537 153 aa14.43□□□□□ -0.1
C9orf3-213ENST00000471978 ALKAL2Q6UX46 152 aa14.43□□□□□ -0.1
C9orf3-213ENST00000471978 AKAP14Q86UN6 197 aa14.43□□□□□ -0.1
C9orf3-213ENST00000471978 IGHV3-64A0A075B6Q5 118 aa14.42□□□□□ -0.1
C9orf3-213ENST00000471978 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-213ENST00000471978 IGKV3OR2-268A0A0C4DH90 116 aa14.42□□□□□ -0.1
C9orf3-213ENST00000471978 SLPIP03973 132 aa14.42□□□□□ -0.1
C9orf3-213ENST00000471978 TEX261Q6UWH6 196 aa14.42□□□□□ -0.1
C9orf3-213ENST00000471978 GAGE12HA6NDE8 117 aa14.41□□□□□ -0.1
C9orf3-213ENST00000471978 NCR2O95944 276 aa14.41□□□□□ -0.1
C9orf3-213ENST00000471978 CEBPGP53567 150 aa14.41□□□□□ -0.1
C9orf3-213ENST00000471978 AMMECR1LQ6DCA0 310 aa14.41□□□□□ -0.1
C9orf3-213ENST00000471978 FAM231DQ6ZW35 169 aa14.41□□□□□ -0.1
C9orf3-213ENST00000471978 A8MWL6 223 aa14.4□□□□□ -0.1
C9orf3-213ENST00000471978 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-213ENST00000471978 IGKV2-29A2NJV5 120 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-213ENST00000471978 SDHAF1A6NFY7 115 aa14.39□□□□□ -0.11
C9orf3-213ENST00000471978 APCSP02743 223 aa14.39□□□□□ -0.11
C9orf3-213ENST00000471978 HNRNPA3P51991 378 aaKnown RBP14.39□□□□□ -0.11
C9orf3-213ENST00000471978 CIRBPQ14011 172 aaKnown RBP14.39□□□□□ -0.11
C9orf3-213ENST00000471978 RNASEKQ6P5S7 137 aaKnown RBP14.39□□□□□ -0.11
C9orf3-213ENST00000471978 CFAP161Q6P656 301 aa14.39□□□□□ -0.11
C9orf3-213ENST00000471978 LYPD6BQ8NI32 183 aa14.39□□□□□ -0.11
C9orf3-213ENST00000471978 DPH3Q96FX2 82 aa14.39□□□□□ -0.11
C9orf3-213ENST00000471978 C15orf56Q8N910 161 aa14.38□□□□□ -0.11
C9orf3-213ENST00000471978 H7C423 109 aa14.37□□□□□ -0.11
C9orf3-213ENST00000471978 CT83Q5H943 113 aa14.37□□□□□ -0.11
C9orf3-213ENST00000471978 CHCHD10Q8WYQ3 142 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-213ENST00000471978 hCG_2014768A0A024R1R8 64 aa14.36□□□□□ -0.11
C9orf3-213ENST00000471978 CHTF8P0CG12 524 aa14.36□□□□□ -0.11
C9orf3-213ENST00000471978 FGF6P10767 208 aa14.36□□□□□ -0.11
C9orf3-213ENST00000471978 SERTAD4-AS1Q5TG53 156 aa14.36□□□□□ -0.11
C9orf3-213ENST00000471978 BORCS7Q96B45 105 aa14.36□□□□□ -0.11
C9orf3-213ENST00000471978 I3L3M4 83 aa14.35□□□□□ -0.11
C9orf3-213ENST00000471978 PMCHP20382 165 aa14.35□□□□□ -0.11
C9orf3-213ENST00000471978 RNF185Q96GF1 192 aa14.35□□□□□ -0.11
C9orf3-213ENST00000471978 HMCN2Q8NDA2 5059 aa14.35□□□□□ -0.11
C9orf3-213ENST00000471978 HIGD2BQ4VC39 106 aa14.34□□□□□ -0.11
C9orf3-213ENST00000471978 SPACA4Q8TDM5 124 aa14.34□□□□□ -0.11
C9orf3-213ENST00000471978 SMIM7Q9BQ49 75 aa14.34□□□□□ -0.11
C9orf3-213ENST00000471978 EIF5A2Q9GZV4 153 aaKnown RBP14.34□□□□□ -0.11
C9orf3-213ENST00000471978 A0A087WYN8 130 aa14.33□□□□□ -0.12
C9orf3-213ENST00000471978 TRBV6-5A0A0K0K1A5 114 aa14.33□□□□□ -0.12
C9orf3-213ENST00000471978 FAM231BA6NCW3 169 aa14.32□□□□□ -0.12
C9orf3-213ENST00000471978 GAS8-AS1O95177 125 aa14.32□□□□□ -0.12
C9orf3-213ENST00000471978 ZNF25P17030 456 aaPredicted RBP14.32□□□□□ -0.12
C9orf3-213ENST00000471978 RPS10P46783 165 aaKnown RBP14.32□□□□□ -0.12
C9orf3-213ENST00000471978 LINC01551Q86U37 167 aa14.32□□□□□ -0.12
C9orf3-213ENST00000471978 ST20Q9HBF5 79 aa14.32□□□□□ -0.12
C9orf3-213ENST00000471978 A0A1B0GUT8 65 aa14.31□□□□□ -0.12
C9orf3-213ENST00000471978 HIGD1CA8MV81 97 aa14.31□□□□□ -0.12
C9orf3-213ENST00000471978 TSKUQ8WUA8 353 aa14.31□□□□□ -0.12
C9orf3-213ENST00000471978 TMEM101Q96IK0 257 aa14.31□□□□□ -0.12
C9orf3-213ENST00000471978 BTF3L4Q96K17 158 aa14.31□□□□□ -0.12
C9orf3-213ENST00000471978 COX6A2Q02221 97 aa14.3□□□□□ -0.12
C9orf3-213ENST00000471978 OR5A1Q8NGJ0 315 aa14.3□□□□□ -0.12
C9orf3-213ENST00000471978 TMEM191AQ9H0A3 160 aa14.3□□□□□ -0.12
C9orf3-213ENST00000471978 ZNF727A8MUV8 499 aa14.29□□□□□ -0.12
C9orf3-213ENST00000471978 NDUFS6O75380 124 aaKnown RBP14.29□□□□□ -0.12
C9orf3-213ENST00000471978 TSHBP01222 138 aa14.29□□□□□ -0.12
C9orf3-213ENST00000471978 FOXI1Q12951 378 aa14.29□□□□□ -0.12
C9orf3-213ENST00000471978 TMEM242Q9NWH2 141 aa14.29□□□□□ -0.12
C9orf3-213ENST00000471978 GVQW2A0A096LPI5 108 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-213ENST00000471978 ESDP10768 282 aa14.28□□□□□ -0.12
C9orf3-213ENST00000471978 MRAP2Q96G30 205 aa14.28□□□□□ -0.12
C9orf3-213ENST00000471978 FAM210AQ96ND0 272 aa14.28□□□□□ -0.12
C9orf3-213ENST00000471978 OSTCQ9NRP0 149 aa14.28□□□□□ -0.12
C9orf3-213ENST00000471978 PLAC8Q9NZF1 115 aa14.28□□□□□ -0.12
C9orf3-213ENST00000471978 RAB4AP20338 218 aa14.27□□□□□ -0.13
C9orf3-213ENST00000471978 XCL1P47992 114 aa14.27□□□□□ -0.13
C9orf3-213ENST00000471978 PRSS3P2Q8NHM4 247 aa14.27□□□□□ -0.13
C9orf3-213ENST00000471978 LINC00959A0A1B0GUT2 108 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms