RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 HLA-DQA1P01909 254 aa9.73□□□□□ -0.85
VPS8-221ENST00000471655 COTL1Q14019 142 aa9.73□□□□□ -0.85
VPS8-221ENST00000471655 CT83Q5H943 113 aa9.73□□□□□ -0.85
VPS8-221ENST00000471655 TEX261Q6UWH6 196 aa9.73□□□□□ -0.85
VPS8-221ENST00000471655 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
VPS8-221ENST00000471655 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
VPS8-221ENST00000471655 PRSS1P07477 247 aa9.72□□□□□ -0.85
VPS8-221ENST00000471655 CLPSL2Q6UWE3 100 aa9.72□□□□□ -0.85
VPS8-221ENST00000471655 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
VPS8-221ENST00000471655 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
VPS8-221ENST00000471655 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.86
VPS8-221ENST00000471655 AMTP48728 403 aa9.71□□□□□ -0.86
VPS8-221ENST00000471655 UBE2L6O14933 153 aa9.7□□□□□ -0.86
VPS8-221ENST00000471655 NCR2O95944 276 aa9.7□□□□□ -0.86
VPS8-221ENST00000471655 C9orf163Q8N9P6 203 aa9.7□□□□□ -0.86
VPS8-221ENST00000471655 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
VPS8-221ENST00000471655 FAM210AQ96ND0 272 aa9.7□□□□□ -0.86
VPS8-221ENST00000471655 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
VPS8-221ENST00000471655 EIF5A2Q9GZV4 153 aaKnown RBP9.7□□□□□ -0.86
VPS8-221ENST00000471655 TRAV26-2A0A0B4J265 109 aa9.69□□□□□ -0.86
VPS8-221ENST00000471655 FAM231BA6NCW3 169 aa9.69□□□□□ -0.86
VPS8-221ENST00000471655 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
VPS8-221ENST00000471655 GFRA4Q9GZZ7 299 aa9.69□□□□□ -0.86
VPS8-221ENST00000471655 TRBV6-5A0A0K0K1A5 114 aa9.68□□□□□ -0.86
VPS8-221ENST00000471655 H7C423 109 aa9.68□□□□□ -0.86
VPS8-221ENST00000471655 CEBPGP53567 150 aa9.68□□□□□ -0.86
VPS8-221ENST00000471655 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
VPS8-221ENST00000471655 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
VPS8-221ENST00000471655 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
VPS8-221ENST00000471655 HERC1Q15751 4861 aa9.67□□□□□ -0.86
VPS8-221ENST00000471655 MYCBP2O75592 4640 aa9.67□□□□□ -0.86
VPS8-221ENST00000471655 IGLV10-54A0A075B6I4 117 aa9.67□□□□□ -0.86
VPS8-221ENST00000471655 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
VPS8-221ENST00000471655 SRP19P09132 144 aaKnown RBP9.67□□□□□ -0.86
VPS8-221ENST00000471655 DEFB104AQ8WTQ1 72 aa9.67□□□□□ -0.86
VPS8-221ENST00000471655 BORCS7Q96B45 105 aa9.67□□□□□ -0.86
VPS8-221ENST00000471655 DMBT1Q9UGM3 2413 aaPredicted RBP9.67□□□□□ -0.86
VPS8-221ENST00000471655 FLG2Q5D862 2391 aaPredicted RBP9.66□□□□□ -0.86
VPS8-221ENST00000471655 A0A1B0GUT8 65 aa9.66□□□□□ -0.86
VPS8-221ENST00000471655 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
VPS8-221ENST00000471655 CNBPP62633 177 aaKnown RBP9.66□□□□□ -0.86
VPS8-221ENST00000471655 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
VPS8-221ENST00000471655 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
VPS8-221ENST00000471655 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
VPS8-221ENST00000471655 I3L3M4 83 aa9.64□□□□□ -0.87
VPS8-221ENST00000471655 APCSP02743 223 aa9.64□□□□□ -0.87
VPS8-221ENST00000471655 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
VPS8-221ENST00000471655 FAM74A3Q4VXF1 159 aa9.64□□□□□ -0.87
VPS8-221ENST00000471655 A0A1B0GVG6 124 aa9.63□□□□□ -0.87
VPS8-221ENST00000471655 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
VPS8-221ENST00000471655 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
VPS8-221ENST00000471655 PMCHP20382 165 aa9.63□□□□□ -0.87
VPS8-221ENST00000471655 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
VPS8-221ENST00000471655 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
VPS8-221ENST00000471655 FGF6P10767 208 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 RAB4AP20338 218 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 TMEM241Q24JQ0 296 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 CFAP161Q6P656 301 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 MRAP2Q96G30 205 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 ST20Q9HBF5 79 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 AP5S1Q9NUS5 200 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 V9GYV3 84 aa9.62□□□□□ -0.87
VPS8-221ENST00000471655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.61□□□□□ -0.87
VPS8-221ENST00000471655 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
VPS8-221ENST00000471655 IGKV2-29A2NJV5 120 aaPredicted RBP9.61□□□□□ -0.87
VPS8-221ENST00000471655 ESDP10768 282 aa9.61□□□□□ -0.87
VPS8-221ENST00000471655 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
VPS8-221ENST00000471655 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
VPS8-221ENST00000471655 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
VPS8-221ENST00000471655 IGHV3-64A0A075B6Q5 118 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 TRBV27A0A0K0K1C4 114 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 GAGE12HA6NDE8 117 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 TSHBP01222 138 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 SLPIP03973 132 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 RIGQ13278 110 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
VPS8-221ENST00000471655 NUP35Q8NFH5 326 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
VPS8-221ENST00000471655 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
VPS8-221ENST00000471655 RPL23P62829 140 aaKnown RBP9.59□□□□□ -0.87
VPS8-221ENST00000471655 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
VPS8-221ENST00000471655 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
VPS8-221ENST00000471655 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
VPS8-221ENST00000471655 BTF3L4Q96K17 158 aa9.59□□□□□ -0.87
VPS8-221ENST00000471655 NAT8BQ9UHF3 227 aa9.59□□□□□ -0.87
VPS8-221ENST00000471655 PANO1I0J062 215 aa9.58□□□□□ -0.88
VPS8-221ENST00000471655 J3QL48 77 aa9.58□□□□□ -0.88
VPS8-221ENST00000471655 PPP1R17O96001 155 aa9.58□□□□□ -0.88
VPS8-221ENST00000471655 RPS10P46783 165 aaKnown RBP9.58□□□□□ -0.88
VPS8-221ENST00000471655 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
VPS8-221ENST00000471655 AMN1Q8IY45 258 aa9.58□□□□□ -0.88
VPS8-221ENST00000471655 TMEM101Q96IK0 257 aa9.58□□□□□ -0.88
VPS8-221ENST00000471655 NAT8Q9UHE5 227 aa9.58□□□□□ -0.88
VPS8-221ENST00000471655 IGKV3OR2-268A0A0C4DH90 116 aa9.57□□□□□ -0.88
VPS8-221ENST00000471655 C9JQL5 133 aa9.57□□□□□ -0.88
VPS8-221ENST00000471655 PEA15Q15121 130 aa9.57□□□□□ -0.88
VPS8-221ENST00000471655 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
VPS8-221ENST00000471655 SMIM27A0A1W2PRY6 76 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms