RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 USP17L23D6RBM5 183 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 GATCO43716 136 aaKnown RBP6.24□□□□□ -1.41
POLR1A-206ENST00000471427 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
POLR1A-206ENST00000471427 HAMPP81172 84 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 REG3AQ06141 175 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 COTL1Q14019 142 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 SMIM15Q7Z3B0 74 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 C20orf203Q8NBC4 194 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 GFRA4Q9GZZ7 299 aa6.24□□□□□ -1.41
POLR1A-206ENST00000471427 hCG_2014768A0A024R1R8 64 aa6.23□□□□□ -1.41
POLR1A-206ENST00000471427 H7C423 109 aa6.23□□□□□ -1.41
POLR1A-206ENST00000471427 NCR2O95944 276 aa6.23□□□□□ -1.41
POLR1A-206ENST00000471427 PRSS1P07477 247 aa6.23□□□□□ -1.41
POLR1A-206ENST00000471427 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
POLR1A-206ENST00000471427 EIF5A2Q9GZV4 153 aaKnown RBP6.23□□□□□ -1.41
POLR1A-206ENST00000471427 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 TRBV6-5A0A0K0K1A5 114 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 LINC01551Q86U37 167 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 TSKUQ8WUA8 353 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 SMIM7Q9BQ49 75 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 OSTCQ9NRP0 149 aa6.22□□□□□ -1.41
POLR1A-206ENST00000471427 A0A1B0GUT8 65 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 UBE2L6O14933 153 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 HLA-DQA1P01909 254 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 SRP19P09132 144 aaKnown RBP6.21□□□□□ -1.42
POLR1A-206ENST00000471427 AMTP48728 403 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.42
POLR1A-206ENST00000471427 LINC00528Q8N1L1 170 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 TMEM191AQ9H0A3 160 aa6.21□□□□□ -1.42
POLR1A-206ENST00000471427 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
POLR1A-206ENST00000471427 TRAV26-2A0A0B4J265 109 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 ZNF727A8MUV8 499 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 HIGD1CA8MV81 97 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 FAM74A3Q4VXF1 159 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 CLPSL2Q6UWE3 100 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 SDIM1Q6ZPB5 146 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 DEFB104AQ8WTQ1 72 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
POLR1A-206ENST00000471427 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
POLR1A-206ENST00000471427 SDHAF1A6NFY7 115 aa6.19□□□□□ -1.42
POLR1A-206ENST00000471427 I3L3M4 83 aa6.19□□□□□ -1.42
POLR1A-206ENST00000471427 CEBPGP53567 150 aa6.19□□□□□ -1.42
POLR1A-206ENST00000471427 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
POLR1A-206ENST00000471427 TMEM241Q24JQ0 296 aa6.19□□□□□ -1.42
POLR1A-206ENST00000471427 CFAP161Q6P656 301 aa6.19□□□□□ -1.42
POLR1A-206ENST00000471427 BORCS7Q96B45 105 aa6.19□□□□□ -1.42
POLR1A-206ENST00000471427 IGLV10-54A0A075B6I4 117 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 A0A1B0GVG6 124 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
POLR1A-206ENST00000471427 ESDP10768 282 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 ZNF25P17030 456 aaPredicted RBP6.18□□□□□ -1.42
POLR1A-206ENST00000471427 RAB4AP20338 218 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 PMCHP20382 165 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
POLR1A-206ENST00000471427 MRAP2Q96G30 205 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 RNF185Q96GF1 192 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 V9GYV3 84 aa6.18□□□□□ -1.42
POLR1A-206ENST00000471427 TRBV27A0A0K0K1C4 114 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 PPP1R17O96001 155 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 APCSP02743 223 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 SLPIP03973 132 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 FGF6P10767 208 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 RIGQ13278 110 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 CIRBPQ14011 172 aaKnown RBP6.17□□□□□ -1.42
POLR1A-206ENST00000471427 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 ISOC2Q96AB3 205 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 AP5S1Q9NUS5 200 aa6.17□□□□□ -1.42
POLR1A-206ENST00000471427 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
POLR1A-206ENST00000471427 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.16□□□□□ -1.42
POLR1A-206ENST00000471427 hDV102S1A0JD36 115 aa6.16□□□□□ -1.42
POLR1A-206ENST00000471427 RPL23P62829 140 aaKnown RBP6.16□□□□□ -1.42
POLR1A-206ENST00000471427 PEA15Q15121 130 aa6.16□□□□□ -1.42
POLR1A-206ENST00000471427 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
POLR1A-206ENST00000471427 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.15□□□□□ -1.42
POLR1A-206ENST00000471427 SMIM27A0A1W2PRY6 76 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 IGKV2-29A2NJV5 120 aaPredicted RBP6.15□□□□□ -1.42
POLR1A-206ENST00000471427 VCYO14598 125 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 GAS8-AS1O95177 125 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 TSHBP01222 138 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 RNASEKQ6P5S7 137 aaKnown RBP6.15□□□□□ -1.42
POLR1A-206ENST00000471427 MRPL52Q86TS9 123 aaKnown RBP6.15□□□□□ -1.42
POLR1A-206ENST00000471427 OR5A1Q8NGJ0 315 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 CHCHD10Q8WYQ3 142 aaPredicted RBP6.15□□□□□ -1.42
POLR1A-206ENST00000471427 NAT8Q9UHE5 227 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
POLR1A-206ENST00000471427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
POLR1A-206ENST00000471427 IGHV3-64A0A075B6Q5 118 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 A0A1B0GW15 77 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 LINC00862A6NCI5 91 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 C9JQL5 133 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 RPS10P46783 165 aaKnown RBP6.14□□□□□ -1.43
POLR1A-206ENST00000471427 FAM104BQ5XKR9 115 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 AMN1Q8IY45 258 aa6.14□□□□□ -1.43
POLR1A-206ENST00000471427 C15orf56Q8N910 161 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms