RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SMIM15Q7Z3B0 74 aa6.74□□□□□ -1.33
SF3A1-207ENST00000471342 Q8N8P6 123 aa6.74□□□□□ -1.33
SF3A1-207ENST00000471342 ATP6V0E2Q8NHE4 81 aa6.74□□□□□ -1.33
SF3A1-207ENST00000471342 PRADC1Q9BSG0 188 aa6.74□□□□□ -1.33
SF3A1-207ENST00000471342 TCAPO15273 167 aa6.73□□□□□ -1.33
SF3A1-207ENST00000471342 RPL36AP83881 106 aaKnown RBP6.73□□□□□ -1.33
SF3A1-207ENST00000471342 MRPL23Q16540 153 aaKnown RBP6.73□□□□□ -1.33
SF3A1-207ENST00000471342 RPL36ALQ969Q0 106 aaKnown RBP6.73□□□□□ -1.33
SF3A1-207ENST00000471342 GTSF1LQ9H1H1 148 aa6.73□□□□□ -1.33
SF3A1-207ENST00000471342 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
SF3A1-207ENST00000471342 ICOSQ9Y6W8 199 aa6.73□□□□□ -1.33
SF3A1-207ENST00000471342 TRBV6-8A0A0A6YYG3 113 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 LOC389332A0A1B0GUA5 103 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 NUPR2A6NF83 97 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 IFITM10A6NMD0 228 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
SF3A1-207ENST00000471342 NIT1Q86X76 327 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 C15orf53Q8NAA6 179 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 UPK3BQ9BT76 320 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
SF3A1-207ENST00000471342 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
SF3A1-207ENST00000471342 C3orf84H3BNL1 204 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 H7C1H1 209 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 I3L3M4 83 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 VCYO14598 125 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 NUDT3O95989 172 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 LELP1Q5T871 98 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 TNFRSF18Q9Y5U5 241 aa6.71□□□□□ -1.34
SF3A1-207ENST00000471342 IGIPA6NJ69 53 aa6.7□□□□□ -1.34
SF3A1-207ENST00000471342 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-207ENST00000471342 C20orf203Q8NBC4 194 aa6.7□□□□□ -1.34
SF3A1-207ENST00000471342 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
SF3A1-207ENST00000471342 IGLV4-60A0A075B6I1 120 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 SERF1AO75920 110 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 PPP1R17O96001 155 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 LINC00614P0C842 121 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 TCTAP57738 103 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 RPL39P62891 51 aaKnown RBP6.69□□□□□ -1.34
SF3A1-207ENST00000471342 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 MAP1LC3AQ9H492 121 aa6.69□□□□□ -1.34
SF3A1-207ENST00000471342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-207ENST00000471342 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
SF3A1-207ENST00000471342 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
SF3A1-207ENST00000471342 PMCHP20382 165 aa6.68□□□□□ -1.34
SF3A1-207ENST00000471342 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
SF3A1-207ENST00000471342 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
SF3A1-207ENST00000471342 LINC00173Q6ZV60 143 aa6.68□□□□□ -1.34
SF3A1-207ENST00000471342 MRPL52Q86TS9 123 aaKnown RBP6.68□□□□□ -1.34
SF3A1-207ENST00000471342 NXT2Q9NPJ8 142 aaKnown RBP6.68□□□□□ -1.34
SF3A1-207ENST00000471342 UBE2D4Q9Y2X8 147 aa6.68□□□□□ -1.34
SF3A1-207ENST00000471342 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
SF3A1-207ENST00000471342 IGHV1-24A0A0C4DH33 117 aa6.67□□□□□ -1.34
SF3A1-207ENST00000471342 LGALS9CQ6DKI2 356 aa6.67□□□□□ -1.34
SF3A1-207ENST00000471342 SH2D6Q7Z4S9 175 aa6.67□□□□□ -1.34
SF3A1-207ENST00000471342 OPRPNQ99935 248 aaPredicted RBP6.67□□□□□ -1.34
SF3A1-207ENST00000471342 KLK5Q9Y337 293 aaPredicted RBP6.67□□□□□ -1.34
SF3A1-207ENST00000471342 C5orf52A6NGY3 159 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 C1orf196B1AJZ1 125 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 K7EMI3 77 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 FCER1GP30273 86 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 RBX1P62877 108 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 COTL1Q14019 142 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 LAGE3Q14657 143 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 MPV17L2Q567V2 206 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 Q6ZR54 194 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 FAM19A2Q8N3H0 131 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 Q8N976 141 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
SF3A1-207ENST00000471342 PRR34Q9NV39 138 aa6.66□□□□□ -1.34
SF3A1-207ENST00000471342 A0A1B0GUV1 79 aa6.65□□□□□ -1.34
SF3A1-207ENST00000471342 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
SF3A1-207ENST00000471342 ZC2HC1BQ5TFG8 222 aa6.65□□□□□ -1.34
SF3A1-207ENST00000471342 ENHOQ6UWT2 76 aa6.65□□□□□ -1.34
SF3A1-207ENST00000471342 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
SF3A1-207ENST00000471342 CDC42SE2Q9NRR3 84 aa6.65□□□□□ -1.34
SF3A1-207ENST00000471342 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
SF3A1-207ENST00000471342 FGF6P10767 208 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 AMTP48728 403 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 GAGE6Q13070 117 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
SF3A1-207ENST00000471342 HIST3H2BBQ8N257 126 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 PRSS3P2Q8NHM4 247 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 AP5S1Q9NUS5 200 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
SF3A1-207ENST00000471342 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
SF3A1-207ENST00000471342 IGLV4-3A0A075B6K6 122 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 TRBV25-1A0A075B6N4 114 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 H7C423 109 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 NDUFA6P56556 154 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 TMEM97Q5BJF2 176 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 AMELXQ99217 191 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 Q9H8V8 135 aa6.63□□□□□ -1.35
SF3A1-207ENST00000471342 CCL18P55774 89 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms