RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 Q6ZN92 141 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 ZNRF2Q8NHG8 242 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 TMEM141Q96I45 108 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 TIMM17AQ99595 171 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 PRADC1Q9BSG0 188 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 C11orf68Q9H3H3 251 aaKnown RBP6.63□□□□□ -1.35
VPS52-216ENST00000471309 ZMAT4Q9H898 229 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 RETNQ9HD89 108 aa6.63□□□□□ -1.35
VPS52-216ENST00000471309 TRRAPQ9Y4A5 3859 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 IGIPA6NJ69 53 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 PRSS1P07477 247 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 DAD1P61803 113 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 PKIAP61925 76 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 ODF1Q14990 250 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 ATOH7Q8N100 152 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 ZNF664Q8N3J9 261 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 CHCHD7Q9BUK0 85 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 CELA1Q9UNI1 258 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 HHLA3Q9XRX5 114 aa6.62□□□□□ -1.35
VPS52-216ENST00000471309 TRAV9-2A0A087WT02 112 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 IGHV3-38A0A0C4DH36 116 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 GAGE12JA6NER3 117 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 TSTD3H0UI37 97 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 K7EIL1 84 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 ATP5G1P05496 136 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 NPSP0C0P6 89 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 CRYBA4P53673 196 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 RPL39P62891 51 aaKnown RBP6.61□□□□□ -1.35
VPS52-216ENST00000471309 GAGE1Q13065 139 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 GAGE4Q13068 117 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 GAGE5Q13069 117 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 GAGE13Q4V321 117 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 DEFB104AQ8WTQ1 72 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 PHLDA1Q8WV24 401 aaPredicted RBP6.61□□□□□ -1.35
VPS52-216ENST00000471309 BAALCQ8WXS3 180 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 PRO0255Q9UI72 69 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
VPS52-216ENST00000471309 A0A087WX48 190 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 PMCHL2Q9BQD1 86 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 SPATA25Q9BR10 227 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 GTSF1LQ9H1H1 148 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
VPS52-216ENST00000471309 PCP4L1A6NKN8 68 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 F8VRH5 84 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 DPM2O94777 84 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 PRB2P02812 416 aaPredicted RBP6.59□□□□□ -1.35
VPS52-216ENST00000471309 SPATA45Q537H7 98 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 TMEM97Q5BJF2 176 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 SBSPONQ8IVN8 264 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 TM2D3Q9BRN9 247 aa6.59□□□□□ -1.35
VPS52-216ENST00000471309 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 HSBP1L1C9JCN9 74 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 IGKCP01834 107 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 GYPEP15421 78 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 PLNP26678 52 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 PMVKQ15126 192 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 NTM-AS1Q6ZSK4 140 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 TIMM21Q9BVV7 248 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
VPS52-216ENST00000471309 UBE2D4Q9Y2X8 147 aa6.58□□□□□ -1.36
VPS52-216ENST00000471309 CHTOPQ9Y3Y2 248 aaKnown RBP6.58□□□□□ -1.36
VPS52-216ENST00000471309 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.57□□□□□ -1.36
VPS52-216ENST00000471309 TRAV26-1A0A087WT03 109 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 hDV102S1A0JD36 115 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 IGKV2-29A2NJV5 120 aaPredicted RBP6.57□□□□□ -1.36
VPS52-216ENST00000471309 PRSS29PA6NIE9 313 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 H7C423 109 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 PAX4O43316 350 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 SMAGPQ0VAQ4 97 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
VPS52-216ENST00000471309 VSIG2Q96IQ7 327 aa6.57□□□□□ -1.36
VPS52-216ENST00000471309 TRBV6-8A0A0A6YYG3 113 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 A0A0J9YWU9 116 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 F5H768 121 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 IGLC3P0DOY3 106 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 DEFB121Q5J5C9 76 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 ATP6V0E2Q8NHE4 81 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 AMELXQ99217 191 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 TMEM243Q9BU79 118 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 CST9LQ9H4G1 147 aa6.56□□□□□ -1.36
VPS52-216ENST00000471309 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
VPS52-216ENST00000471309 CMYA5Q8N3K9 4069 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 IGLV4-69A0A075B6H9 119 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 DDTP30046 118 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
VPS52-216ENST00000471309 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 OPRPNQ99935 248 aaPredicted RBP6.55□□□□□ -1.36
VPS52-216ENST00000471309 VCX2Q9H322 139 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 UQCR10Q9UDW1 63 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
VPS52-216ENST00000471309 A0A0J9YY99 117 aa6.54□□□□□ -1.36
VPS52-216ENST00000471309 H3BNG1 76 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms