RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 UBE2D2P62837 147 aa18.34■□□□□ 0.53
U2AF1-208ENST00000471250 KPRPQ5T749 579 aaPredicted RBP18.34■□□□□ 0.53
U2AF1-208ENST00000471250 PKD1L1Q8TDX9 2849 aa18.33■□□□□ 0.53
U2AF1-208ENST00000471250 GAGE12JA6NER3 117 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 TSTD3H0UI37 97 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 GAGE1Q13065 139 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 GAGE4Q13068 117 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 GAGE5Q13069 117 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 COTL1Q14019 142 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 ODF1Q14990 250 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 GAGE13Q4V321 117 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 TIMM17AQ99595 171 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 PRADC1Q9BSG0 188 aa18.33■□□□□ 0.52
U2AF1-208ENST00000471250 DAZ4Q86SG3 579 aaKnown RBP18.32■□□□□ 0.52
U2AF1-208ENST00000471250 TMEM141Q96I45 108 aa18.32■□□□□ 0.52
U2AF1-208ENST00000471250 RETNQ9HD89 108 aa18.32■□□□□ 0.52
U2AF1-208ENST00000471250 DAZ3Q9NR90 486 aaKnown RBP18.32■□□□□ 0.52
U2AF1-208ENST00000471250 CELA1Q9UNI1 258 aa18.32■□□□□ 0.52
U2AF1-208ENST00000471250 TRAV12-1A0A0B4J245 112 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 SPART-AS1P0CW21 52 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 MAJINQ3KP22 176 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 SPATA45Q537H7 98 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 CHCHD7Q9BUK0 85 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 DAD1P61803 113 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 BAALCQ8WXS3 180 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 HHLA3Q9XRX5 114 aa18.31■□□□□ 0.52
U2AF1-208ENST00000471250 A0A087WX48 190 aa18.3■□□□□ 0.52
U2AF1-208ENST00000471250 LOC100131303A0A0U1RQF7 123 aa18.3■□□□□ 0.52
U2AF1-208ENST00000471250 PRB2P02812 416 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-208ENST00000471250 TEX48A0A1B0GUV7 120 aa18.27■□□□□ 0.52
U2AF1-208ENST00000471250 hDV102S1A0JD36 115 aa18.27■□□□□ 0.52
U2AF1-208ENST00000471250 K7EIL1 84 aa18.27■□□□□ 0.52
U2AF1-208ENST00000471250 CRYBA4P53673 196 aa18.27■□□□□ 0.52
U2AF1-208ENST00000471250 LURAP1LQ8IV03 231 aa18.27■□□□□ 0.52
U2AF1-208ENST00000471250 LINC00694P0DN24 101 aa18.26■□□□□ 0.51
U2AF1-208ENST00000471250 PRO0255Q9UI72 69 aa18.26■□□□□ 0.51
U2AF1-208ENST00000471250 PYGO1Q9Y3Y4 419 aa18.25■□□□□ 0.51
U2AF1-208ENST00000471250 HSBP1L1C9JCN9 74 aa18.25■□□□□ 0.51
U2AF1-208ENST00000471250 MRPL35Q9NZE8 188 aaKnown RBP18.25■□□□□ 0.51
U2AF1-208ENST00000471250 NBEAL2Q6ZNJ1 2754 aa18.24■□□□□ 0.51
U2AF1-208ENST00000471250 PRSS29PA6NIE9 313 aa18.24■□□□□ 0.51
U2AF1-208ENST00000471250 DPM2O94777 84 aa18.23■□□□□ 0.51
U2AF1-208ENST00000471250 IGKCP01834 107 aa18.23■□□□□ 0.51
U2AF1-208ENST00000471250 ATP5G1P05496 136 aa18.23■□□□□ 0.51
U2AF1-208ENST00000471250 NTM-AS1Q6ZSK4 140 aa18.23■□□□□ 0.51
U2AF1-208ENST00000471250 GTSF1LQ9H1H1 148 aa18.23■□□□□ 0.51
U2AF1-208ENST00000471250 CHTOPQ9Y3Y2 248 aaKnown RBP18.23■□□□□ 0.51
U2AF1-208ENST00000471250 F8VRH5 84 aa18.22■□□□□ 0.51
U2AF1-208ENST00000471250 SBSPONQ8IVN8 264 aa18.22■□□□□ 0.51
U2AF1-208ENST00000471250 C11orf68Q9H3H3 251 aaKnown RBP18.22■□□□□ 0.51
U2AF1-208ENST00000471250 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.22■□□□□ 0.51
U2AF1-208ENST00000471250 IGKV2-29A2NJV5 120 aaPredicted RBP18.22■□□□□ 0.51
U2AF1-208ENST00000471250 PMVKQ15126 192 aa18.22■□□□□ 0.51
U2AF1-208ENST00000471250 NPSP0C0P6 89 aa18.21■□□□□ 0.51
U2AF1-208ENST00000471250 SPANXA1Q9NS26 97 aa18.21■□□□□ 0.51
U2AF1-208ENST00000471250 IGLV4-3A0A075B6K6 122 aa18.2■□□□□ 0.5
U2AF1-208ENST00000471250 GYPEP15421 78 aa18.2■□□□□ 0.5
U2AF1-208ENST00000471250 DDTP30046 118 aa18.2■□□□□ 0.5
U2AF1-208ENST00000471250 CST9LQ9H4G1 147 aa18.2■□□□□ 0.5
U2AF1-208ENST00000471250 UBE2D4Q9Y2X8 147 aa18.2■□□□□ 0.5
U2AF1-208ENST00000471250 PAX4O43316 350 aa18.19■□□□□ 0.5
U2AF1-208ENST00000471250 OPRPNQ99935 248 aaPredicted RBP18.19■□□□□ 0.5
U2AF1-208ENST00000471250 IGLC3P0DOY3 106 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 PLNP26678 52 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 ZC2HC1BQ5TFG8 222 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 DEFB121Q5J5C9 76 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 PAPPA-AS1Q5QFB9 102 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 FAM104AQ969W3 186 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 MIEN1Q9BRT3 115 aa18.18■□□□□ 0.5
U2AF1-208ENST00000471250 C12orf74Q32Q52 190 aa18.17■□□□□ 0.5
U2AF1-208ENST00000471250 TIMM21Q9BVV7 248 aa18.17■□□□□ 0.5
U2AF1-208ENST00000471250 LINC00587B1AMM8 73 aa18.16■□□□□ 0.5
U2AF1-208ENST00000471250 STPG4Q8N801 248 aa18.16■□□□□ 0.5
U2AF1-208ENST00000471250 VSIG2Q96IQ7 327 aa18.16■□□□□ 0.5
U2AF1-208ENST00000471250 TMEM97Q5BJF2 176 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 CEMP1Q6PRD7 247 aaPredicted RBP18.15■□□□□ 0.5
U2AF1-208ENST00000471250 SPATA25Q9BR10 227 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 F5H768 121 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 ANKRD39Q53RE8 183 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 ATP6V0E2Q8NHE4 81 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 TM2D3Q9BRN9 247 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 VCX2Q9H322 139 aa18.15■□□□□ 0.5
U2AF1-208ENST00000471250 C14orf144Q96I85 54 aa18.14■□□□□ 0.49
U2AF1-208ENST00000471250 AMELXQ99217 191 aa18.14■□□□□ 0.49
U2AF1-208ENST00000471250 TMEM243Q9BU79 118 aa18.14■□□□□ 0.49
U2AF1-208ENST00000471250 UQCR10Q9UDW1 63 aa18.14■□□□□ 0.49
U2AF1-208ENST00000471250 TRBV25-1A0A075B6N4 114 aa18.13■□□□□ 0.49
U2AF1-208ENST00000471250 IGLV4-69A0A075B6H9 119 aa18.12■□□□□ 0.49
U2AF1-208ENST00000471250 A0A0J9YY99 117 aa18.12■□□□□ 0.49
U2AF1-208ENST00000471250 TRBV6-8A0A0A6YYG3 113 aa18.12■□□□□ 0.49
U2AF1-208ENST00000471250 A0A0J9YWU9 116 aa18.12■□□□□ 0.49
U2AF1-208ENST00000471250 HTN3P15516 51 aa18.12■□□□□ 0.49
U2AF1-208ENST00000471250 MRPS36P82909 103 aaKnown RBP18.12■□□□□ 0.49
U2AF1-208ENST00000471250 MRPL52Q86TS9 123 aaKnown RBP18.12■□□□□ 0.49
U2AF1-208ENST00000471250 TRAV26-1A0A087WT03 109 aa18.11■□□□□ 0.49
U2AF1-208ENST00000471250 H7C423 109 aa18.11■□□□□ 0.49
U2AF1-208ENST00000471250 FGF6P10767 208 aa18.1■□□□□ 0.49
U2AF1-208ENST00000471250 SMAGPQ0VAQ4 97 aa18.1■□□□□ 0.49
U2AF1-208ENST00000471250 CSDC2Q9Y534 153 aaKnown RBP18.1■□□□□ 0.49
U2AF1-208ENST00000471250 Q6ZUT4 128 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms