RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 SPAG11AQ6PDA7 123 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 SSBP3-AS1Q7Z2R9 100 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 C5orf38Q86SI9 138 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 DPH3P1Q9H4G8 78 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 SPEF2Q9C093 1822 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 FSIP2Q5CZC0 6907 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 ARAP2Q8WZ64 1704 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 NAIPQ13075 1403 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 PIEZO1Q92508 2521 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 TRBV7-3A0A075B6L6 115 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 CTXND1A0A1B0GTU2 59 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 TNFP01375 233 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 PPP3R1P63098 170 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 COX6A2Q02221 97 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 CFAP126Q5VTH2 177 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 BAGE3Q86Y29 109 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 C8orf59Q8N0T1 100 aaPredicted RBP0.2□□□□□ -2.38
HERC3-208ENST00000470815 NPVFQ9HCQ7 196 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 SCP2D1Q9UJQ7 156 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 IER3IP1Q9Y5U9 82 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 A2ML1A8K2U0 1454 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 GOLGA3Q08378 1498 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 MYH7P12883 1935 aa0.2□□□□□ -2.38
HERC3-208ENST00000470815 TPRP12270 2363 aaKnown RBP0.2□□□□□ -2.38
HERC3-208ENST00000470815 CPSF1Q10570 1443 aaKnown RBP0.2□□□□□ -2.38
HERC3-208ENST00000470815 SYNE1Q8NF91 8797 aaKnown RBP0.2□□□□□ -2.38
HERC3-208ENST00000470815 MYH9P35579 1960 aaKnown RBP0.19□□□□□ -2.38
HERC3-208ENST00000470815 DOCK1Q14185 1865 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 MRC1P22897 1456 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 PIGBOS1A0A0B4J2F0 54 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 ZNF815PA8K554 130 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 SSSCA1O60232 199 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 SMIM6P0DI80 62 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 IFITM1P13164 125 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 GNG4P50150 75 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 Q5VV11 94 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 COMMD6Q7Z4G1 85 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 FAM213BQ8TBF2 198 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 TMEM203Q969S6 136 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 CYP4F30PQ9H0H9 118 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 NDUFA4L2Q9NRX3 87 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 R4GMQ9 66 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 PARP14Q460N5 1801 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 PPIP5K1Q6PFW1 1433 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 NCOA3Q9Y6Q9 1424 aa0.19□□□□□ -2.38
HERC3-208ENST00000470815 KTN1Q86UP2 1357 aaKnown RBP0.19□□□□□ -2.38
HERC3-208ENST00000470815 MYO7AQ13402 2215 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 BCL9LQ86UU0 1499 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 UBE2L5PA0A1B0GUS4 154 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 IGLC7A0M8Q6 106 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 C20orf202A1L168 122 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 FAM24AA6NFZ4 105 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 C10orf142B7Z368 130 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 ATP6V1G2-DDX39BF2Z307 99 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 CHKB-CPT1BH3BT56 60 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 HMGN4O00479 90 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 SPINK8P0C7L1 97 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 SNCAP37840 140 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 UBE2L3P68036 154 aaKnown RBP0.18□□□□□ -2.38
HERC3-208ENST00000470815 SFTA2Q6UW10 78 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 UBE2DNLQ8IWF7 75 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 SVBPQ8N300 66 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 C14orf144Q96I85 54 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 MGST2Q99735 147 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 LINC00472Q9H8W2 130 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 DYNLRB1Q9NP97 96 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 LENEPQ9Y5L5 61 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 V9GYH0 126 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 SIPA1L3O60292 1781 aaPredicted RBP0.18□□□□□ -2.38
HERC3-208ENST00000470815 ABCA12Q86UK0 2595 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 CADP27708 2225 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 QRICH2Q9H0J4 1663 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 ROBO1Q9Y6N7 1651 aa0.18□□□□□ -2.38
HERC3-208ENST00000470815 MYOM2P54296 1465 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 LRRC37A3O60309 1634 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 F8VRH5 84 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 BCE1O60756 84 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 S100PP25815 95 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 GNG11P61952 73 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 HAMPP81172 84 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 MRPS10P82664 201 aaKnown RBP0.17□□□□□ -2.38
HERC3-208ENST00000470815 HSD52Q0P140 79 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 SMG6Q86US8 1419 aaKnown RBP0.17□□□□□ -2.38
HERC3-208ENST00000470815 MYOZ3Q8TDC0 251 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 AMELXQ99217 191 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 ZNF236Q9UL36 1845 aa0.17□□□□□ -2.38
HERC3-208ENST00000470815 POLQO75417 2590 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 NALCNQ8IZF0 1738 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 PI4KAP42356 2102 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
HERC3-208ENST00000470815 C10orf71Q711Q0 1435 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 PATJQ8NI35 1801 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 CACNA1CQ13936 2221 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 ASXL3Q9C0F0 2248 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 TRAV22A0A0B4J277 110 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 M0R3E3 92 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 DCDP81605 110 aaKnown RBP0.16□□□□□ -2.38
HERC3-208ENST00000470815 Q5BKY6 102 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 TMEM170BQ5T4T1 132 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 GTF2H5Q6ZYL4 71 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms